This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3udi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:08, 13 July 2022) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G==
==Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G==
-
<StructureSection load='3udi' size='340' side='right' caption='[[3udi]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='3udi' size='340' side='right'caption='[[3udi]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3udi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aciba Aciba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UDI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3udi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aciba Aciba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UDI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PNM:OPEN+FORM+-+PENICILLIN+G'>PNM</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PNM:OPEN+FORM+-+PENICILLIN+G'>PNM</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3udf|3udf]], [[3udx|3udx]], [[3ue0|3ue0]], [[3ue1|3ue1]], [[3ue3|3ue3]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3udf|3udf]], [[3udx|3udx]], [[3ue0|3ue0]], [[3ue1|3ue1]], [[3ue3|3ue3]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ponA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=470 ACIBA])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ponA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=470 ACIBA])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3udi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udi OCA], [http://pdbe.org/3udi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3udi RCSB], [http://www.ebi.ac.uk/pdbsum/3udi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3udi ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3udi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3udi OCA], [https://pdbe.org/3udi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3udi RCSB], [https://www.ebi.ac.uk/pdbsum/3udi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3udi ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 20: Line 20:
==See Also==
==See Also==
-
*[[Penicillin-binding protein|Penicillin-binding protein]]
+
*[[Penicillin-binding protein 3D structures|Penicillin-binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 26: Line 26:
</StructureSection>
</StructureSection>
[[Category: Aciba]]
[[Category: Aciba]]
 +
[[Category: Large Structures]]
[[Category: Han, S]]
[[Category: Han, S]]
[[Category: Penicillin-binding protein-antibiotic complex]]
[[Category: Penicillin-binding protein-antibiotic complex]]
[[Category: Transglycosylase]]
[[Category: Transglycosylase]]
[[Category: Transpeptidase]]
[[Category: Transpeptidase]]

Current revision

Crystal structure of Acinetobacter baumannii PBP1a in complex with penicillin G

PDB ID 3udi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools