2xih

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:32, 20 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==THE STRUCTURE OF ASCORBATE PEROXIDASE COMPOUND III==
+
==The structure of ascorbate peroxidase Compound III==
-
<StructureSection load='2xih' size='340' side='right' caption='[[2xih]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
+
<StructureSection load='2xih' size='340' side='right'caption='[[2xih]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2xih]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XIH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2xih]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XIH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ghe|2ghe]], [[2ghd|2ghd]], [[2vcn|2vcn]], [[2vcf|2vcf]], [[2vcs|2vcs]], [[1v0h|1v0h]], [[2wd4|2wd4]], [[2cl4|2cl4]], [[2vnx|2vnx]], [[2ggn|2ggn]], [[1oag|1oag]], [[2ghc|2ghc]], [[2vnz|2vnz]], [[1oaf|1oaf]], [[2ghh|2ghh]], [[2vo2|2vo2]], [[2ghk|2ghk]], [[2xif|2xif]], [[2xi6|2xi6]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-ascorbate_peroxidase L-ascorbate peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.11 1.11.1.11] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xih OCA], [https://pdbe.org/2xih PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xih RCSB], [https://www.ebi.ac.uk/pdbsum/2xih PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xih ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xih OCA], [http://pdbe.org/2xih PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xih RCSB], [http://www.ebi.ac.uk/pdbsum/2xih PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xih ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q43758_SOYBN Q43758_SOYBN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/2xih_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/2xih_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 31:
==See Also==
==See Also==
-
*[[Ascorbate peroxidase|Ascorbate peroxidase]]
+
*[[Ascorbate peroxidase 3D structures|Ascorbate peroxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glycine hispida]]
+
[[Category: Glycine max]]
-
[[Category: L-ascorbate peroxidase]]
+
[[Category: Large Structures]]
-
[[Category: Gumiero, A]]
+
[[Category: Gumiero A]]
-
[[Category: Moody, P C.E]]
+
[[Category: Moody PCE]]
-
[[Category: Raven, E L]]
+
[[Category: Raven EL]]
-
[[Category: Ferrous heme]]
+
-
[[Category: Ferryl ion]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

The structure of ascorbate peroxidase Compound III

PDB ID 2xih

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools