3c28

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:20, 30 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of the product synapse complex==
==Crystal structure of the product synapse complex==
-
<StructureSection load='3c28' size='340' side='right' caption='[[3c28]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='3c28' size='340' side='right'caption='[[3c28]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3c28]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteriophage_p1 Bacteriophage p1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C28 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3C28 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3c28]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_P1 Escherichia phage P1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C28 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C28 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xns|1xns]], [[2hof|2hof]], [[3c29|3c29]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cre ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id= Bacteriophage P1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c28 OCA], [https://pdbe.org/3c28 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c28 RCSB], [https://www.ebi.ac.uk/pdbsum/3c28 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c28 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c28 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c28 OCA], [http://pdbe.org/3c28 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c28 RCSB], [http://www.ebi.ac.uk/pdbsum/3c28 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3c28 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RECR_BPP1 RECR_BPP1]] Catalyzes site-specific recombination between two 34-base-pair LOXP sites. Its role is to maintain the phage genome as a monomeric unit-copy plasmid in the lysogenic state.
+
[https://www.uniprot.org/uniprot/RECR_BPP1 RECR_BPP1] Catalyzes site-specific recombination between two 34-base-pair LOXP sites. Its role is to maintain the phage genome as a monomeric unit-copy plasmid in the lysogenic state.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c28_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c28_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Resolvase|Resolvase]]
+
*[[Resolvase 3D structures|Resolvase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacteriophage p1]]
+
[[Category: Escherichia phage P1]]
-
[[Category: Duyne, G D.Van]]
+
[[Category: Large Structures]]
-
[[Category: Ghosh, K]]
+
[[Category: Ghosh K]]
-
[[Category: Dna integration]]
+
[[Category: Van Duyne GD]]
-
[[Category: Dna recombination]]
+
-
[[Category: Recombination-dna complex]]
+
-
[[Category: Synaptic complex]]
+

Current revision

Crystal structure of the product synapse complex

PDB ID 3c28

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools