2w8b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:48, 13 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==CRYSTAL STRUCTURE OF PROCESSED TOLB IN COMPLEX WITH PAL==
+
==Crystal structure of processed TolB in complex with Pal==
-
<StructureSection load='2w8b' size='340' side='right' caption='[[2w8b]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
+
<StructureSection load='2w8b' size='340' side='right'caption='[[2w8b]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2w8b]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W8B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2w8b]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W8B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ivz|2ivz]], [[1crz|1crz]], [[1oap|1oap]], [[1c5k|1c5k]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w8b OCA], [http://pdbe.org/2w8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w8b RCSB], [http://www.ebi.ac.uk/pdbsum/2w8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w8b ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w8b OCA], [https://pdbe.org/2w8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w8b RCSB], [https://www.ebi.ac.uk/pdbsum/2w8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w8b ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TOLB_ECOLI TOLB_ECOLI]] Involved in the TonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K). Necessary for the colicins to reach their respective targets after initial binding to the bacteria.[HAMAP-Rule:MF_00671]
+
[https://www.uniprot.org/uniprot/TOLB_ECOLI TOLB_ECOLI] Involved in the TonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K). Necessary for the colicins to reach their respective targets after initial binding to the bacteria.[HAMAP-Rule:MF_00671]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w8/2w8b_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w8/2w8b_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 37: Line 37:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Bonsor, D A]]
+
[[Category: Large Structures]]
-
[[Category: Kleanthous, C]]
+
[[Category: Bonsor DA]]
-
[[Category: Sharma, A]]
+
[[Category: Kleanthous C]]
-
[[Category: Bacteriocin transport]]
+
[[Category: Sharma A]]
-
[[Category: Cell membrane]]
+
-
[[Category: Cell outer membrane]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Membrane]]
+
-
[[Category: Outer membrane]]
+
-
[[Category: Pal]]
+
-
[[Category: Palmitate]]
+
-
[[Category: Protein transport membrane protein complex]]
+
-
[[Category: Protein transport-membrane protein complex]]
+
-
[[Category: Tol]]
+
-
[[Category: Tolb]]
+
-
[[Category: Transport]]
+
-
[[Category: Transport protein/lipoprotein]]
+

Current revision

Crystal structure of processed TolB in complex with Pal

PDB ID 2w8b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools