3qik

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:48, 21 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of the first PDZ domain of PREX1==
==Crystal structure of the first PDZ domain of PREX1==
-
<StructureSection load='3qik' size='340' side='right' caption='[[3qik]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
+
<StructureSection load='3qik' size='340' side='right'caption='[[3qik]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3qik]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QIK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QIK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3qik]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QIK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QIK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.285&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PREX1, KIAA1415 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qik OCA], [http://pdbe.org/3qik PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qik RCSB], [http://www.ebi.ac.uk/pdbsum/3qik PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qik ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qik OCA], [https://pdbe.org/3qik PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qik RCSB], [https://www.ebi.ac.uk/pdbsum/3qik PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qik ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/PREX1_HUMAN PREX1_HUMAN]] Functions as a RAC guanine nucleotide exchange factor (GEF), which activates the Rac proteins by exchanging bound GDP for free GTP. Its activity is synergistically activated by phosphatidylinositol 3,4,5-trisphosphate and the beta gamma subunits of heterotrimeric G protein. May function downstream of heterotrimeric G proteins in neutrophils.
+
[https://www.uniprot.org/uniprot/PREX1_HUMAN PREX1_HUMAN] Functions as a RAC guanine nucleotide exchange factor (GEF), which activates the Rac proteins by exchanging bound GDP for free GTP. Its activity is synergistically activated by phosphatidylinositol 3,4,5-trisphosphate and the beta gamma subunits of heterotrimeric G protein. May function downstream of heterotrimeric G proteins in neutrophils.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Large Structures]]
-
[[Category: Bountra, C]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Edwards, A M]]
+
[[Category: Bountra C]]
-
[[Category: Li, Y]]
+
[[Category: Edwards AM]]
-
[[Category: Park, H]]
+
[[Category: Li Y]]
-
[[Category: Structural genomic]]
+
[[Category: Park H]]
-
[[Category: Shen, L]]
+
[[Category: Shen L]]
-
[[Category: Tempel, W]]
+
[[Category: Tempel W]]
-
[[Category: Tong, Y]]
+
[[Category: Tong Y]]
-
[[Category: Weigelt, J]]
+
[[Category: Weigelt J]]
-
[[Category: Hydrolase regulator]]
+
-
[[Category: Pdz domain]]
+
-
[[Category: Sgc]]
+

Current revision

Crystal structure of the first PDZ domain of PREX1

PDB ID 3qik

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools