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| ==Crystal structure of Bs-TpNPPase== | | ==Crystal structure of Bs-TpNPPase== |
- | <StructureSection load='4kn8' size='340' side='right' caption='[[4kn8]], [[Resolution|resolution]] 1.50Å' scene=''> | + | <StructureSection load='4kn8' size='340' side='right'caption='[[4kn8]], [[Resolution|resolution]] 1.50Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4kn8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_12980 Atcc 12980]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KN8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KN8 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4kn8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KN8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KN8 FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ift|4ift]], [[4ig4|4ig4]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.502Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kn8 OCA], [http://pdbe.org/4kn8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kn8 RCSB], [http://www.ebi.ac.uk/pdbsum/4kn8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kn8 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kn8 OCA], [https://pdbe.org/4kn8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kn8 RCSB], [https://www.ebi.ac.uk/pdbsum/4kn8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kn8 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q8L1N9_GEOSE Q8L1N9_GEOSE] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 12980]] | + | [[Category: Geobacillus stearothermophilus]] |
- | [[Category: Gong, W]] | + | [[Category: Large Structures]] |
- | [[Category: Guo, Z]] | + | [[Category: Gong W]] |
- | [[Category: Huang, J]] | + | [[Category: Guo Z]] |
- | [[Category: Ji, C]] | + | [[Category: Huang J]] |
- | [[Category: Wang, F]] | + | [[Category: Ji C]] |
- | [[Category: Hydrolase]]
| + | [[Category: Wang F]] |
| Structural highlights
Function
Q8L1N9_GEOSE
Publication Abstract from PubMed
Thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase) is involved in the Mg(2+)-dependent hydrolysis of the phosphoenzyme at an optimum reaction temperature of 55 degrees C. Bs-TpNPPase has been cloned and overexpressed in the E.coli M15 strain. Based on the conserved active sites, the protein was suggested to be a member of the haloalkanoate dehalogenase (HAD) superfamily. Two site-specific point mutants of Bs-TpNPPase were prepared by changing the catalytic Asp10 and Thr43 to Ala10 and Ala43, respectively. The activity of the two mutants further confirms Bs-TpNPPase as a member of the HAD superfamily. HAD superfamily can be divided into the four subfamilies and play several biochemical roles such as DNA repair, signal transduction and secondary metabolism. To understand the relationship between structure and thermostability in HAD superfamily, Bs-TpNPPase from Bacillus Stearothermophilus was selected. The X-ray crystal structure of Bs-TpNPPase was determined at 1.5A resolution using the molecular replacement phasing method. The structure of Bs-TpNPPase has been deposited and the PDB code is 4KN8. Compared with Bsp, a mesophilic prokaryotic putative p-nitrophenyl phosphatase from Bacillus Subtilis, Bs- TpNPPase showed highly homology but variations in the level of leucine content, aromatic clusters, cation-Pi and hydrophobic interaction. These differences may affect the thermal stability of the protein. The crystal structure of Bs-TpNPPase described herein may serve as a guide to better understand the mechanism of thermostability and provide insights for further mutation work.
Crystal structure of thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase).,Guo Z, Wang F, Shen T, Huang J, Wang Y, Ji C Protein Pept Lett. 2014 May;21(5):483-9. PMID:24256105[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Guo Z, Wang F, Shen T, Huang J, Wang Y, Ji C. Crystal structure of thermostable p-nitrophenylphosphatase from Bacillus Stearothermophilus (Bs-TpNPPase). Protein Pept Lett. 2014 May;21(5):483-9. PMID:24256105
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