4mod
From Proteopedia
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| ==Structure of the MERS-CoV fusion core== | ==Structure of the MERS-CoV fusion core== | ||
| - | <StructureSection load='4mod' size='340' side='right' caption='[[4mod]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='4mod' size='340' side='right'caption='[[4mod]], [[Resolution|resolution]] 1.90Å' scene=''> | 
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4mod]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4mod]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_betacoronavirus_2c_EMC/2012 Human betacoronavirus 2c EMC/2012] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4MOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4MOD FirstGlance]. <br> | 
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.901Å</td></tr> | 
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4mod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4mod OCA], [https://pdbe.org/4mod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4mod RCSB], [https://www.ebi.ac.uk/pdbsum/4mod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4mod ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
| </table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SPIKE_MERS1 SPIKE_MERS1] Attaches the virion to the cell membrane by interacting with host receptor, initiating the infection (By similarity). Interacts with host DPP4 to mediate virla entry.[HAMAP-Rule:MF_04099]<ref>PMID:23486063</ref>   Mediates fusion of the virion and cellular membranes by acting as a class I viral fusion protein. Under the current model, the protein has at least three conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and target cell membranes.[HAMAP-Rule:MF_04099]  Acts as a viral fusion peptide which is unmasked following S2 cleavage occurring upon virus endocytosis.[HAMAP-Rule:MF_04099] | ||
| <div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| == Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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| </div> | </div> | ||
| <div class="pdbe-citations 4mod" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4mod" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Sandbox 3001|Sandbox 3001]] | ||
| + | *[[Spike protein|Spike protein]] | ||
| == References == | == References == | ||
| <references/> | <references/> | ||
| __TOC__ | __TOC__ | ||
| </StructureSection> | </StructureSection> | ||
| - | [[Category: Human betacoronavirus 2c  | + | [[Category: Human betacoronavirus 2c EMC/2012]] | 
| - | [[Category: Deng | + | [[Category: Large Structures]] | 
| - | [[Category: Gao | + | [[Category: Synthetic construct]] | 
| - | [[Category: Gao | + | [[Category: Deng Y]] | 
| - | [[Category: Geng | + | [[Category: Gao GF]] | 
| - | [[Category: Li | + | [[Category: Gao J]] | 
| - | [[Category: Lu | + | [[Category: Geng H]] | 
| - | [[Category: Qi | + | [[Category: Li Y]] | 
| - | [[Category: Tan | + | [[Category: Lu G]] | 
| - | [[Category: Wu | + | [[Category: Qi J]] | 
| - | [[Category: Xiao | + | [[Category: Tan W]] | 
| - | [[Category: Yan | + | [[Category: Wu Y]] | 
| - | + | [[Category: Xiao H]] | |
| - | + | [[Category: Yan J]] | |
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Current revision
Structure of the MERS-CoV fusion core
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Categories: Human betacoronavirus 2c EMC/2012 | Large Structures | Synthetic construct | Deng Y | Gao GF | Gao J | Geng H | Li Y | Lu G | Qi J | Tan W | Wu Y | Xiao H | Yan J
