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| | ==The structure of a chicken anti-prostate specific antigen scFv== | | ==The structure of a chicken anti-prostate specific antigen scFv== |
| - | <StructureSection load='4p49' size='340' side='right' caption='[[4p49]], [[Resolution|resolution]] 1.40Å' scene=''> | + | <StructureSection load='4p49' size='340' side='right'caption='[[4p49]], [[Resolution|resolution]] 1.40Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4p49]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P49 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P49 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4p49]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P49 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P49 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4Å</td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4p48|4p48]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p49 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p49 OCA], [http://pdbe.org/4p49 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p49 RCSB], [http://www.ebi.ac.uk/pdbsum/4p49 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p49 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p49 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p49 OCA], [https://pdbe.org/4p49 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p49 RCSB], [https://www.ebi.ac.uk/pdbsum/4p49 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p49 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| | </div> | | </div> |
| | <div class="pdbe-citations 4p49" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 4p49" style="background-color:#fffaf0;"></div> |
| | + | |
| | + | ==See Also== |
| | + | *[[Antibody 3D structures|Antibody 3D structures]] |
| | + | *[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]] |
| | + | *[[3D structures of non-human antibody|3D structures of non-human antibody]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Chick]] | + | [[Category: Gallus gallus]] |
| - | [[Category: Caradoc-Davies, T T]] | + | [[Category: Large Structures]] |
| - | [[Category: Conroy, P J]] | + | [[Category: Caradoc-Davies TT]] |
| - | [[Category: Gilgunn, S]] | + | [[Category: Conroy PJ]] |
| - | [[Category: Hearty, S]] | + | [[Category: Gilgunn S]] |
| - | [[Category: Kennedy, R J.O]]
| + | [[Category: Hearty S]] |
| - | [[Category: Law, R H.P]] | + | [[Category: Law RHP]] |
| - | [[Category: Llyod, G]] | + | [[Category: Llyod G]] |
| - | [[Category: Whisstock, J C]] | + | [[Category: O'Kennedy RJ]] |
| - | [[Category: Cardiac troponin i]] | + | [[Category: Whisstock JC]] |
| - | [[Category: Chicken]]
| + | |
| - | [[Category: Immune system]]
| + | |
| - | [[Category: Immunoglobulin]]
| + | |
| - | [[Category: Phage display]]
| + | |
| - | [[Category: Recombinant antibody]]
| + | |
| - | [[Category: Scfv]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Antibodies are high value therapeutic, diagnostic, biotechnological, and research tools. Combinatorial approaches to antibody discovery have facilitated access to unique antibodies by surpassing the diversity limitations of the natural repertoire, exploitation of immune repertoires from multiple species, and tailoring selections to isolate antibodies with desirable biophysical attributes. The V-gene repertoire of the chicken does not utilize highly diverse sequence and structures, which is in stark contrast to the mechanism employed by humans, mice, and primates. Recent exploitation of the avian immune system has generated high quality, high affinity antibodies to a wide range of antigens for a number of therapeutic, diagnostic and biotechnological applications. Furthermore, extensive examination of the amino acid characteristics of the chicken repertoire has provided significant insight into mechanisms employed by the avian immune system. A paucity of avian antibody crystal structures has limited our understanding of the structural consequences of these uniquely chicken features. This paper presents the crystal structure of two chicken single chain fragment variable (scFv) antibodies generated from large libraries by phage display against important human antigen targets, which capture two unique CDRL1 canonical classes in the presence and absence of a non-canonical disulfide constrained CDRH3. These structures cast light on the unique structural features of chicken antibodies and contribute further to our collective understanding of the unique mechanisms of diversity and biochemical attributes that render the chicken repertoire of particular value for antibody generation.
Reconciling the Structural Attributes of Avian Antibodies.,Conroy PJ, Law RH, Gilgunn S, Hearty S, Caradoc-Davies TT, Lloyd G, O'Kennedy RJ, Whisstock JC J Biol Chem. 2014 May 30;289(22):15384-15392. Epub 2014 Apr 15. PMID:24737329[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Conroy PJ, Law RH, Gilgunn S, Hearty S, Caradoc-Davies TT, Lloyd G, O'Kennedy RJ, Whisstock JC. Reconciling the Structural Attributes of Avian Antibodies. J Biol Chem. 2014 May 30;289(22):15384-15392. Epub 2014 Apr 15. PMID:24737329 doi:http://dx.doi.org/10.1074/jbc.M114.562470
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