This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3r5v
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==The structure of calcium bound Thermococcus thioreducens inorganic pyrophosphatase at 298K== | ==The structure of calcium bound Thermococcus thioreducens inorganic pyrophosphatase at 298K== | ||
| - | <StructureSection load='3r5v' size='340' side='right' caption='[[3r5v]], [[Resolution|resolution]] 1.65Å' scene=''> | + | <StructureSection load='3r5v' size='340' side='right'caption='[[3r5v]], [[Resolution|resolution]] 1.65Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3r5v]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3r5v]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_thioreducens Thermococcus thioreducens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R5V FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r5v OCA], [https://pdbe.org/3r5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r5v RCSB], [https://www.ebi.ac.uk/pdbsum/3r5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r5v ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/H0USY5_9EURY H0USY5_9EURY] Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.[HAMAP-Rule:MF_00209] | ||
==See Also== | ==See Also== | ||
| - | *[[Inorganic pyrophosphatase|Inorganic pyrophosphatase]] | + | *[[Inorganic pyrophosphatase 3D structures|Inorganic pyrophosphatase 3D structures]] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Thermococcus thioreducens]] |
| - | [[Category: | + | [[Category: Coates L]] |
| - | [[Category: | + | [[Category: Hughes RC]] |
| - | [[Category: | + | [[Category: Meehan EJ]] |
| - | [[Category: | + | [[Category: Ng JD]] |
| - | + | ||
Current revision
The structure of calcium bound Thermococcus thioreducens inorganic pyrophosphatase at 298K
| |||||||||||
