4coo
From Proteopedia
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==Crystal structure of human cystathionine beta-synthase (delta516-525) at 2.0 angstrom resolution== | ==Crystal structure of human cystathionine beta-synthase (delta516-525) at 2.0 angstrom resolution== | ||
- | <StructureSection load='4coo' size='340' side='right' caption='[[4coo]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='4coo' size='340' side='right'caption='[[4coo]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4coo]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4coo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4COO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4COO FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4coo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4coo OCA], [https://pdbe.org/4coo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4coo RCSB], [https://www.ebi.ac.uk/pdbsum/4coo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4coo ProSAT]</span></td></tr> |
</table> | </table> | ||
== Disease == | == Disease == | ||
- | [ | + | [https://www.uniprot.org/uniprot/CBS_HUMAN CBS_HUMAN] Defects in CBS are the cause of cystathionine beta-synthase deficiency (CBSD) [MIM:[https://omim.org/entry/236200 236200]. CBSD is an enzymatic deficiency resulting in altered sulfur metabolism and homocystinuria. The clinical features of untreated homocystinuria due to CBS deficiency include myopia, ectopia lentis, mental retardation, skeletal anomalies resembling Marfan syndrome, and thromboembolic events. Light skin and hair can also be present. Biochemical features include increased urinary homocystine and methionine.<ref>PMID:1301198</ref> <ref>PMID:8353501</ref> <ref>PMID:7506602</ref> <ref>PMID:7981678</ref> <ref>PMID:7849717</ref> <ref>PMID:7967489</ref> <ref>PMID:7611293</ref> <ref>PMID:7762555</ref> <ref>PMID:7635485</ref> <ref>PMID:8528202</ref> <ref>PMID:7564249</ref> <ref>PMID:8755636</ref> <ref>PMID:8803779</ref> <ref>PMID:9156316</ref> <ref>PMID:9361025</ref> <ref>PMID:8990018</ref> <ref>PMID:9266356</ref> <ref>PMID:10462600</ref> <ref>PMID:10215408</ref> <ref>PMID:9889017</ref> <ref>PMID:10408774</ref> <ref>PMID:11013450</ref> <ref>PMID:11359213</ref> <ref>PMID:11553052</ref> <ref>PMID:12007221</ref> <ref>PMID:12124992</ref> <ref>PMID:12815602</ref> <ref>PMID:14635102</ref> <ref>PMID:15146473</ref> <ref>PMID:15365998</ref> <ref>PMID:15993874</ref> <ref>PMID:16205833</ref> <ref>PMID:16429402</ref> <ref>PMID:21520339</ref> <ref>PMID:21240075</ref> |
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/CBS_HUMAN CBS_HUMAN] Only known pyridoxal phosphate-dependent enzyme that contains heme. Important regulator of hydrogen sulfide, especially in the brain, utilizing cysteine instead of serine to catalyze the formation of hydrogen sulfide. Hydrogen sulfide is a gastratransmitter with signaling and cytoprotective effects such as acting as a neuromodulator in the brain to protect neurons against hypoxic injury (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 4coo" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4coo" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Cystathionine ò-synthase 3D structures|Cystathionine ò-synthase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Arrowsmith | + | [[Category: Arrowsmith C]] |
- | [[Category: Bountra | + | [[Category: Bountra C]] |
- | [[Category: Bradley | + | [[Category: Bradley A]] |
- | [[Category: Burgess-Brown | + | [[Category: Burgess-Brown N]] |
- | [[Category: Bushell | + | [[Category: Bushell S]] |
- | [[Category: Carpenter | + | [[Category: Carpenter ES]] |
- | + | [[Category: Edwards A]] | |
- | [[Category: Edwards | + | [[Category: Froese DS]] |
- | [[Category: Froese | + | [[Category: Kiyani W]] |
- | [[Category: Kiyani | + | [[Category: Kopec J]] |
- | [[Category: Kopec | + | [[Category: McCorvie TJ]] |
- | [[Category: McCorvie | + | [[Category: Strain-Damerell C]] |
- | [[Category: Strain-Damerell | + | [[Category: Tallant C]] |
- | [[Category: Tallant | + | [[Category: Vollamar M]] |
- | [[Category: Vollamar | + | [[Category: Yue WW]] |
- | [[Category: Yue | + | [[Category: Von Delft F]] |
- | [[Category: | + | |
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Current revision
Crystal structure of human cystathionine beta-synthase (delta516-525) at 2.0 angstrom resolution
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Categories: Homo sapiens | Large Structures | Arrowsmith C | Bountra C | Bradley A | Burgess-Brown N | Bushell S | Carpenter ES | Edwards A | Froese DS | Kiyani W | Kopec J | McCorvie TJ | Strain-Damerell C | Tallant C | Vollamar M | Yue WW | Von Delft F