3miz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:11, 6 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of a putative transcriptional regulator protein, Lacl family from Rhizobium etli==
==Crystal structure of a putative transcriptional regulator protein, Lacl family from Rhizobium etli==
-
<StructureSection load='3miz' size='340' side='right' caption='[[3miz]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
+
<StructureSection load='3miz' size='340' side='right'caption='[[3miz]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3miz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhiec Rhiec]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MIZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MIZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3miz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhizobium_etli_CFN_42 Rhizobium etli CFN 42]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MIZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MIZ FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHE_PE00360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=347834 RHIEC])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3miz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3miz OCA], [http://pdbe.org/3miz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3miz RCSB], [http://www.ebi.ac.uk/pdbsum/3miz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3miz ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3miz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3miz OCA], [https://pdbe.org/3miz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3miz RCSB], [https://www.ebi.ac.uk/pdbsum/3miz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3miz ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q2K0Z9_RHIEC Q2K0Z9_RHIEC]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mi/3miz_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mi/3miz_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Rhiec]]
+
[[Category: Large Structures]]
-
[[Category: Burley, S K]]
+
[[Category: Rhizobium etli CFN 42]]
-
[[Category: Structural genomic]]
+
[[Category: Burley SK]]
-
[[Category: Palani, K]]
+
[[Category: Palani K]]
-
[[Category: Swaminathan, S]]
+
[[Category: Swaminathan S]]
-
[[Category: Lacl family]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: Transcription regulator]]
+

Current revision

Crystal structure of a putative transcriptional regulator protein, Lacl family from Rhizobium etli

PDB ID 3miz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools