|
|
(2 intermediate revisions not shown.) |
Line 1: |
Line 1: |
| | | |
| ==Crystal structure of DotD from Legionella== | | ==Crystal structure of DotD from Legionella== |
- | <StructureSection load='3ady' size='340' side='right' caption='[[3ady]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='3ady' size='340' side='right'caption='[[3ady]], [[Resolution|resolution]] 2.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[3ady]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Legph Legph]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ADY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ADY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[3ady]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ADY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ADY FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dotD, lpg2674 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272624 LEGPH])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ady FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ady OCA], [http://pdbe.org/3ady PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ady RCSB], [http://www.ebi.ac.uk/pdbsum/3ady PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ady ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ady FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ady OCA], [https://pdbe.org/3ady PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ady RCSB], [https://www.ebi.ac.uk/pdbsum/3ady PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ady ProSAT]</span></td></tr> |
| </table> | | </table> |
- | <div style="background-color:#fffaf0;">
| + | == Function == |
- | == Publication Abstract from PubMed == | + | [https://www.uniprot.org/uniprot/Q5ZS45_LEGPH Q5ZS45_LEGPH] |
- | The Dot/Icm type IVB secretion system (T4BSS) is a pivotal determinant of Legionella pneumophila pathogenesis. L. pneumophila translocate more than 100 effector proteins into host cytoplasm using Dot/Icm T4BSS, modulating host cellular functions to establish a replicative niche within host cells. The T4BSS core complex spanning the inner and outer membranes is thought to be made up of at least five proteins: DotC, DotD, DotF, DotG and DotH. DotH is the outer membrane protein; its targeting depends on lipoproteins DotC and DotD. However, the core complex structure and assembly mechanism are still unknown. Here, we report the crystal structure of DotD at 2.0 A resolution. The structure of DotD is distinct from that of VirB7, the outer membrane lipoprotein of the type IVA secretion system. In contrast, the C-terminal domain of DotD is remarkably similar to the N-terminal subdomain of secretins, the integral outer membrane proteins that form substrate conduits for the type II and the type III secretion systems (T2SS and T3SS). A short beta-segment in the otherwise disordered N-terminal region, located on the hydrophobic cleft of the C-terminal domain, is essential for outer membrane targeting of DotH and Dot/Icm T4BSS core complex formation. These findings uncover an intriguing link between T4BSS and T2SS/T3SS.
| + | |
- | | + | |
- | Crystal structure of Legionella DotD: insights into the relationship between type IVB and type II/III secretion systems.,Nakano N, Kubori T, Kinoshita M, Imada K, Nagai H PLoS Pathog. 2010 Oct 7;6(10). pii: e1001129. PMID:20949065<ref>PMID:20949065</ref>
| + | |
- | | + | |
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
| + | |
- | </div>
| + | |
- | <div class="pdbe-citations 3ady" style="background-color:#fffaf0;"></div>
| + | |
- | == References ==
| + | |
- | <references/>
| + | |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Legph]] | + | [[Category: Large Structures]] |
- | [[Category: Imada, K]] | + | [[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]] |
- | [[Category: Kinoshita, M]] | + | [[Category: Imada K]] |
- | [[Category: Kubori, T]] | + | [[Category: Kinoshita M]] |
- | [[Category: Nagai, H]] | + | [[Category: Kubori T]] |
- | [[Category: Nakano, N]] | + | [[Category: Nagai H]] |
- | [[Category: Mth1598-like]]
| + | [[Category: Nakano N]] |
- | [[Category: Proton transport]]
| + | |