This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4bol
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide== | ==Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide== | ||
| - | <StructureSection load='4bol' size='340' side='right' caption='[[4bol]], [[Resolution|resolution]] 1.70Å' scene=''> | + | <StructureSection load='4bol' size='340' side='right'caption='[[4bol]], [[Resolution|resolution]] 1.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4bol]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4bol]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BOL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4BOL FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=J0J:D-ALANYL-N-[(2S,6R)-6-AMINO-6-CARBOXY-1-{[(1R)-1-CARBOXYETHYL]AMINO}-1-OXOHEXAN-2-YL]-D-GLUTAMINE'>J0J</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=J0J:D-ALANYL-N-[(2S,6R)-6-AMINO-6-CARBOXY-1-{[(1R)-1-CARBOXYETHYL]AMINO}-1-OXOHEXAN-2-YL]-D-GLUTAMINE'>J0J</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4bol FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4bol OCA], [https://pdbe.org/4bol PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4bol RCSB], [https://www.ebi.ac.uk/pdbsum/4bol PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4bol ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9HT86_PSEAE Q9HT86_PSEAE] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 21: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Artola-Recolons | + | [[Category: Pseudomonas aeruginosa PAO1]] |
| - | [[Category: Boggess | + | [[Category: Artola-Recolons C]] |
| - | [[Category: Carrasco-Lopez | + | [[Category: Boggess B]] |
| - | [[Category: Hellman | + | [[Category: Carrasco-Lopez C]] |
| - | [[Category: Hermoso | + | [[Category: Hellman LM]] |
| - | [[Category: Hesek | + | [[Category: Hermoso JA]] |
| - | [[Category: Lastochkin | + | [[Category: Hesek D]] |
| - | [[Category: Lee | + | [[Category: Lastochkin E]] |
| - | [[Category: Martinez-Caballero | + | [[Category: Lee M]] |
| - | [[Category: Mobashery | + | [[Category: Martinez-Caballero S]] |
| - | [[Category: Spink | + | [[Category: Mobashery S]] |
| - | [[Category: Zhang | + | [[Category: Spink EE]] |
| - | + | [[Category: Zhang W]] | |
Current revision
Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide
| |||||||||||
