4tw3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:23, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound==
==Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound==
-
<StructureSection load='4tw3' size='340' side='right' caption='[[4tw3]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='4tw3' size='340' side='right'caption='[[4tw3]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4tw3]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TW3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4tw3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prochlorococcus_marinus_str._MIT_9313 Prochlorococcus marinus str. MIT 9313]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TW3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Octadecanal_decarbonylase Octadecanal decarbonylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.99.5 4.1.99.5] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tw3 OCA], [http://pdbe.org/4tw3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tw3 RCSB], [http://www.ebi.ac.uk/pdbsum/4tw3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tw3 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tw3 OCA], [https://pdbe.org/4tw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tw3 RCSB], [https://www.ebi.ac.uk/pdbsum/4tw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tw3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/ALDEC_PROMM ALDEC_PROMM]] Catalyzes the decarbonylation of fatty aldehydes to alkanes. Requires the presence of ferredoxin, ferredoxin reductase and NADPH for in vitro decarbonylase activity (By similarity). Involved in the biosynthesis of alkanes, mainly heptadecane and pentadecane.<ref>PMID:20671186</ref>
+
[https://www.uniprot.org/uniprot/ALDEC_PROMM ALDEC_PROMM] Catalyzes the decarbonylation of fatty aldehydes to alkanes. Requires the presence of ferredoxin, ferredoxin reductase and NADPH for in vitro decarbonylase activity (By similarity). Involved in the biosynthesis of alkanes, mainly heptadecane and pentadecane.<ref>PMID:20671186</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Octadecanal decarbonylase]]
+
[[Category: Large Structures]]
-
[[Category: Buer, B C]]
+
[[Category: Prochlorococcus marinus str. MIT 9313]]
-
[[Category: Das, D]]
+
[[Category: Buer BC]]
-
[[Category: Marsh, E N.G]]
+
[[Category: Das D]]
-
[[Category: Paul, B]]
+
[[Category: Marsh ENG]]
-
[[Category: Stuckey, J A]]
+
[[Category: Paul B]]
-
[[Category: Alpha-helix]]
+
[[Category: Stuckey JA]]
-
[[Category: Hydrocarbon production]]
+
-
[[Category: Non-heme di-iron protein]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound

PDB ID 4tw3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4tw3"
Personal tools