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| | ==Crystal structure of C-terminus truncated Alkylhydroperoxide Reductase subunit C (AhpC1-172) from E. coli== | | ==Crystal structure of C-terminus truncated Alkylhydroperoxide Reductase subunit C (AhpC1-172) from E. coli== |
| - | <StructureSection load='4ql7' size='340' side='right' caption='[[4ql7]], [[Resolution|resolution]] 3.75Å' scene=''> | + | <StructureSection load='4ql7' size='340' side='right'caption='[[4ql7]], [[Resolution|resolution]] 3.75Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4ql7]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QL7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QL7 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ql7]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QL7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QL7 FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ql9|4ql9]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.75Å</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ql7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ql7 OCA], [http://pdbe.org/4ql7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ql7 RCSB], [http://www.ebi.ac.uk/pdbsum/4ql7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ql7 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ql7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ql7 OCA], [https://pdbe.org/4ql7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ql7 RCSB], [https://www.ebi.ac.uk/pdbsum/4ql7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ql7 ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Eisenhaber, B]] | + | [[Category: Escherichia coli]] |
| - | [[Category: Eisenhaber, F]] | + | [[Category: Large Structures]] |
| - | [[Category: Gruber, G]] | + | [[Category: Eisenhaber B]] |
| - | [[Category: Kamariah, N]] | + | [[Category: Eisenhaber F]] |
| - | [[Category: Ahpc]] | + | [[Category: Gruber G]] |
| - | [[Category: Oxidoreductase]] | + | [[Category: Kamariah N]] |
| - | [[Category: Peroxiredoxin]]
| + | |
| Structural highlights
Publication Abstract from PubMed
2-Cys peroxiredoxins (Prxs) are a large family of peroxidases, responsible for antioxidant function and regulation in cell signaling, apoptosis and differentiation. The Escherichia coli alkylhydroperoxide reductase (AhpR) is a prototype of the Prxs-family, and is composed of an NADH-dependent AhpF reductase (57kDa) and AhpC (21kDa), catalyzing the reduction of H2O2. We show that the E. coli AhpC (EcAhpC, 187 residues) forms a decameric ring structure under reduced and close to physiological conditions, composed of five catalytic dimers. Single particle analysis of cryo-electron micrographs of C-terminal truncated (EcAhpC1-172 and EcAhpC1-182) and mutated forms of EcAhpC reveals the loss of decamer formation, indicating the importance of the very C-terminus of AhpC in dimer to decamer transition. The crystallographic structures of the truncated EcAhpC1-172 and EcAhpC1-182 demonstrate for the first time that, in contrast to the reduced form, the very C-terminus of the oxidized EcAhpC is oriented away from the AhpC dimer interface and away from the catalytic redox-center, reflecting structural rearrangements during redox-modulation and -oligomerization. Furthermore, using an ensemble of different truncated and mutated EcAhpC protein constructs the importance of the very C-terminus in AhpC activity and in AhpC-AhpF assembly has been demonstrated.
Key roles of the Escherichia coli AhpC C-terminus in assembly and catalysis of alkylhydroperoxide reductase, an enzyme essential for the alleviation of oxidative stress.,Dip PV, Kamariah N, Nartey W, Beushausen C, Kostyuchenko VA, Ng TS, Lok SM, Saw WG, Eisenhaber F, Eisenhaber B, Gruber G Biochim Biophys Acta. 2014 Sep 2. pii: S0005-2728(14)00581-7. doi:, 10.1016/j.bbabio.2014.08.007. PMID:25193562[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Dip PV, Kamariah N, Nartey W, Beushausen C, Kostyuchenko VA, Ng TS, Lok SM, Saw WG, Eisenhaber F, Eisenhaber B, Gruber G. Key roles of the Escherichia coli AhpC C-terminus in assembly and catalysis of alkylhydroperoxide reductase, an enzyme essential for the alleviation of oxidative stress. Biochim Biophys Acta. 2014 Sep 2. pii: S0005-2728(14)00581-7. doi:, 10.1016/j.bbabio.2014.08.007. PMID:25193562 doi:http://dx.doi.org/10.1016/j.bbabio.2014.08.007
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