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4q4w

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==High-resolution crystal structure of Coxsackievirus A24v==
==High-resolution crystal structure of Coxsackievirus A24v==
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<StructureSection load='4q4w' size='340' side='right' caption='[[4q4w]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
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<StructureSection load='4q4w' size='340' side='right'caption='[[4q4w]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4q4w]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Coxsackievirus_a24 Coxsackievirus a24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q4W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Q4W FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4q4w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Coxsackievirus_A24 Coxsackievirus A24]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q4W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q4W FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4q4v|4q4v]], [[4q4x|4q4x]], [[4q4y|4q4y]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HEZ:HEXANE-1,6-DIOL'>HEZ</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4q4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q4w OCA], [http://pdbe.org/4q4w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4q4w RCSB], [http://www.ebi.ac.uk/pdbsum/4q4w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4q4w ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q4w OCA], [https://pdbe.org/4q4w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q4w RCSB], [https://www.ebi.ac.uk/pdbsum/4q4w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q4w ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/V9VEF3_9ENTO V9VEF3_9ENTO]
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The picornaviruses coxsackievirus A24 variant (CVA24v) and enterovirus 70 (EV70) cause continued outbreaks and pandemics of acute hemorrhagic conjunctivitis (AHC), a highly contagious eye disease against which neither vaccines nor antiviral drugs are currently available. Moreover, these viruses can cause symptoms in the cornea, upper respiratory tract, and neurological impairments such as acute flaccid paralysis. EV70 and CVA24v are both known to use 5-N-acetylneuraminic acid (Neu5Ac) for cell attachment, thus providing a putative link between the glycan receptor specificity and cell tropism and disease. We report the structures of an intact human picornavirus in complex with a range of glycans terminating in Neu5Ac. We determined the structure of the CVA24v to 1.40 A resolution, screened different glycans bearing Neu5Ac for CVA24v binding, and structurally characterized interactions with candidate glycan receptors. Biochemical studies verified the relevance of the binding site and demonstrated a preference of CVA24v for alpha2,6-linked glycans. This preference can be rationalized by molecular dynamics simulations that show that alpha2,6-linked glycans can establish more contacts with the viral capsid. Our results form an excellent platform for the design of antiviral compounds to prevent AHC.
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A sialic Acid binding site in a human picornavirus.,Zocher G, Mistry N, Frank M, Hahnlein-Schick I, Ekstrom JO, Arnberg N, Stehle T PLoS Pathog. 2014 Oct 16;10(10):e1004401. doi: 10.1371/journal.ppat.1004401., eCollection 2014 Oct. PMID:25329320<ref>PMID:25329320</ref>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4q4w" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Coxsackievirus a24]]
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[[Category: Coxsackievirus A24]]
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[[Category: Stehle, T]]
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[[Category: Large Structures]]
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[[Category: Zocher, G]]
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[[Category: Stehle T]]
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[[Category: Coxsackievirus a24v]]
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[[Category: Zocher G]]
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[[Category: Virus]]
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Current revision

High-resolution crystal structure of Coxsackievirus A24v

PDB ID 4q4w

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