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- | ==STRUCTURE OF A FAMILY TWO CARBOHYDRATE ESTERASE FROM CLOSTRIDIUM THERMOCELLUM IN COMPLEX WITH CELLOHEXAOSE== | + | ==Structure of a family two carbohydrate esterase from Clostridium thermocellum in complex with cellohexaose== |
- | <StructureSection load='2wao' size='340' side='right' caption='[[2wao]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='2wao' size='340' side='right'caption='[[2wao]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2wao]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_27405 Atcc 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WAO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WAO FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2wao]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus Acetivibrio thermocellus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WAO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WAO FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wab|2wab]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=PRD_900016:beta-cellopentaose'>PRD_900016</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wao OCA], [https://pdbe.org/2wao PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wao RCSB], [https://www.ebi.ac.uk/pdbsum/2wao PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wao ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wao FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wao OCA], [http://pdbe.org/2wao PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wao RCSB], [http://www.ebi.ac.uk/pdbsum/2wao PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wao ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/CELE_ACET2 CELE_ACET2] Multifunctional enzyme involved in the degradation of plant cell wall polysaccharides. Displays endoglucanase activity against carboxymethyl cellulose (CMC) and barley beta-glucan (PubMed:3066698, PubMed:1991028). Also catalyzes the deacetylation of acetylated birchwood xylan and glucomannan, with a preference for the latter, and of the synthetic substrate 4-nitrophenyl acetate (4-NPAc) (PubMed:19338387).<ref>PMID:19338387</ref> <ref>PMID:1991028</ref> <ref>PMID:3066698</ref> |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
| Check<jmol> | | Check<jmol> |
| <jmolCheckbox> | | <jmolCheckbox> |
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wa/2wao_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wa/2wao_consurf.spt"</scriptWhenChecked> |
| <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| <text>to colour the structure by Evolutionary Conservation</text> | | <text>to colour the structure by Evolutionary Conservation</text> |
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| ==See Also== | | ==See Also== |
- | *[[Glucanase|Glucanase]] | + | *[[Glucanase 3D structures|Glucanase 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 27405]] | + | [[Category: Acetivibrio thermocellus]] |
- | [[Category: Cellulase]] | + | [[Category: Large Structures]] |
- | [[Category: Bolam, D N]] | + | [[Category: Bolam DN]] |
- | [[Category: Davies, G J]] | + | [[Category: Davies GJ]] |
- | [[Category: Dodson, E J]] | + | [[Category: Dodson EJ]] |
- | [[Category: Flint, J E]] | + | [[Category: Flint JE]] |
- | [[Category: Fontes, C M.G A]] | + | [[Category: Fontes CMGA]] |
- | [[Category: Gilbert, H J]] | + | [[Category: Gilbert HJ]] |
- | [[Category: Goyal, A]] | + | [[Category: Goyal A]] |
- | [[Category: Izumi, A]] | + | [[Category: Izumi A]] |
- | [[Category: Kolenova, K]] | + | [[Category: Kolenova K]] |
- | [[Category: Money, V A]] | + | [[Category: Money VA]] |
- | [[Category: Montainer, C]] | + | [[Category: Montainer C]] |
- | [[Category: Pinheiro, B A]] | + | [[Category: Pinheiro BA]] |
- | [[Category: Pires, V M.R]] | + | [[Category: Pires VMR]] |
- | [[Category: Prates, J A.M]] | + | [[Category: Prates JAM]] |
- | [[Category: Stalbrand, H]] | + | [[Category: Stalbrand H]] |
- | [[Category: Topakas, E]] | + | [[Category: Topakas E]] |
- | [[Category: Carbohydrate binding]]
| + | |
- | [[Category: Carbohydrate metabolism]]
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- | [[Category: Cellulose degradation]]
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- | [[Category: Esterase]]
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- | [[Category: Glycosidase]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Plant cell wall degradation]]
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- | [[Category: Polysaccharide degradation]]
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| Structural highlights
Function
CELE_ACET2 Multifunctional enzyme involved in the degradation of plant cell wall polysaccharides. Displays endoglucanase activity against carboxymethyl cellulose (CMC) and barley beta-glucan (PubMed:3066698, PubMed:1991028). Also catalyzes the deacetylation of acetylated birchwood xylan and glucomannan, with a preference for the latter, and of the synthetic substrate 4-nitrophenyl acetate (4-NPAc) (PubMed:19338387).[1] [2] [3]
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Multifunctional proteins, which play a critical role in many biological processes, have typically evolved through the recruitment of different domains that have the required functional diversity. Thus the different activities displayed by these proteins are mediated by spatially distinct domains, consistent with the specific chemical requirements of each activity. Indeed, current evolutionary theory argues that the colocalization of diverse activities within an enzyme is likely to be a rare event, because it would compromise the existing activity of the protein. In contrast to this view, a potential example of multifunctional recruitment into a single protein domain is provided by CtCel5C-CE2, which contains an N-terminal module that displays cellulase activity and a C-terminal module, CtCE2, which exhibits a noncatalytic cellulose-binding function but also shares sequence identity with the CE2 family of esterases. Here we show that, unlike other CE2 members, the CtCE2 domain displays divergent catalytic esterase and noncatalytic carbohydrate binding functions. Intriguingly, these diverse activities are housed within the same site on the protein. Thus, a critical component of the active site of CtCE2, the catalytic Ser-His dyad, in harness with inserted aromatic residues, confers noncatalytic binding to cellulose whilst the active site of the domain retains its esterase activity. CtCE2 catalyses deacetylation of noncellulosic plant structural polysaccharides to deprotect these substrates for attack by other enzymes. Yet it also acts as a cellulose-binding domain, which promotes the activity of the appended cellulase on recalcitrant substrates. The CE2 family encapsulates the requirement for multiple activities by biocatalysts that attack challenging macromolecular substrates, including the grafting of a second, powerful and discrete noncatalytic binding functionality into the active site of an enzyme. This article provides a rare example of "gene sharing," where the introduction of a second functionality into the active site of an enzyme does not compromise the original activity of the biocatalyst.
The active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions.,Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387[4]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ. The active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions. PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387 doi:10.1371/journal.pbio.1000071
- ↑ Durrant AJ, Hall J, Hazlewood GP, Gilbert HJ. The non-catalytic C-terminal region of endoglucanase E from Clostridium thermocellum contains a cellulose-binding domain. Biochem J. 1991 Jan 15;273(Pt 2):289-93. doi: 10.1042/bj2730289. PMID:1991028 doi:http://dx.doi.org/10.1042/bj2730289
- ↑ Hall J, Hazlewood GP, Barker PJ, Gilbert HJ. Conserved reiterated domains in Clostridium thermocellum endoglucanases are not essential for catalytic activity. Gene. 1988 Sep 15;69(1):29-38. PMID:3066698
- ↑ Montanier C, Money VA, Pires VM, Flint JE, Pinheiro BA, Goyal A, Prates JA, Izumi A, Stalbrand H, Morland C, Cartmell A, Kolenova K, Topakas E, Dodson EJ, Bolam DN, Davies GJ, Fontes CM, Gilbert HJ. The active site of a carbohydrate esterase displays divergent catalytic and noncatalytic binding functions. PLoS Biol. 2009 Mar 31;7(3):e71. PMID:19338387 doi:10.1371/journal.pbio.1000071
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