This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2uw1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:55, 13 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
==IVY DESATURASE STRUCTURE==
+
==Ivy Desaturase Structure==
-
<StructureSection load='2uw1' size='340' side='right' caption='[[2uw1]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+
<StructureSection load='2uw1' size='340' side='right'caption='[[2uw1]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2uw1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/English_ivy English ivy]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UW1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2UW1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2uw1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hedera_helix Hedera helix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UW1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GVM:(3R)-3-HYDROXY-5,5-DIMETHYLHEXANOIC+ACID'>GVM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acyl-[acyl-carrier-protein]_desaturase Acyl-[acyl-carrier-protein] desaturase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.19.2 1.14.19.2] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GVM:(3R)-3-HYDROXY-5,5-DIMETHYLHEXANOIC+ACID'>GVM</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2uw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uw1 OCA], [http://pdbe.org/2uw1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2uw1 RCSB], [http://www.ebi.ac.uk/pdbsum/2uw1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2uw1 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uw1 OCA], [https://pdbe.org/2uw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uw1 RCSB], [https://www.ebi.ac.uk/pdbsum/2uw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uw1 ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 12: Line 12:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uw/2uw1_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uw/2uw1_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 31:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: English ivy]]
+
[[Category: Hedera helix]]
-
[[Category: Guy, J E]]
+
[[Category: Large Structures]]
-
[[Category: Kumaran, D]]
+
[[Category: Guy JE]]
-
[[Category: Lindqvist, Y]]
+
[[Category: Kumaran D]]
-
[[Category: Shanklin, J]]
+
[[Category: Lindqvist Y]]
-
[[Category: Whittle, E]]
+
[[Category: Shanklin J]]
-
[[Category: Electron transfer]]
+
[[Category: Whittle E]]
-
[[Category: Fatty acid biosynthesis]]
+
-
[[Category: Lipid synthesis]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Ivy Desaturase Structure

PDB ID 2uw1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools