5ags

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:09, 10 January 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP==
==Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP==
-
<StructureSection load='5ags' size='340' side='right' caption='[[5ags]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
+
<StructureSection load='5ags' size='340' side='right'caption='[[5ags]], [[Resolution|resolution]] 1.47&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ags]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AGS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5AGS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ags]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AGS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=38Y:3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED+ADENOSINE'>38Y</scene>, <scene name='pdbligand=MET:METHIONINE'>MET</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.47&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5agr|5agr]], [[5agt|5agt]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=38Y:3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED+ADENOSINE'>38Y</scene>, <scene name='pdbligand=MET:METHIONINE'>MET</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucine--tRNA_ligase Leucine--tRNA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.1.1.4 6.1.1.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ags FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ags OCA], [https://pdbe.org/5ags PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ags RCSB], [https://www.ebi.ac.uk/pdbsum/5ags PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ags ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ags FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ags OCA], [http://pdbe.org/5ags PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ags RCSB], [http://www.ebi.ac.uk/pdbsum/5ags PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ags ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SYL_MYCTU SYL_MYCTU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5ags" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5ags" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Aminoacyl tRNA synthetase 3D structures|Aminoacyl tRNA synthetase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Leucine--tRNA ligase]]
+
[[Category: Large Structures]]
-
[[Category: Alley, M R.K]]
+
[[Category: Mycobacterium tuberculosis H37Rv]]
-
[[Category: Barros, D]]
+
[[Category: Alley MRK]]
-
[[Category: Cooper, C B]]
+
[[Category: Barros D]]
-
[[Category: Cusack, S]]
+
[[Category: Cooper CB]]
-
[[Category: Ding, C]]
+
[[Category: Cusack S]]
-
[[Category: Easom, E E]]
+
[[Category: Ding C]]
-
[[Category: Franzblau, S G]]
+
[[Category: Easom EE]]
-
[[Category: Hernandez, V]]
+
[[Category: Franzblau SG]]
-
[[Category: Lenaerts, A J]]
+
[[Category: Hernandez V]]
-
[[Category: Li, X]]
+
[[Category: Lenaerts AJ]]
-
[[Category: Ma, Z]]
+
[[Category: Li X]]
-
[[Category: Meewan, M]]
+
[[Category: Ma Z]]
-
[[Category: Mendoza, A]]
+
[[Category: Meewan M]]
-
[[Category: Mohan, M]]
+
[[Category: Mendoza A]]
-
[[Category: Palencia, A]]
+
[[Category: Mohan M]]
-
[[Category: Parish, T]]
+
[[Category: Palencia A]]
-
[[Category: Plattner, J J]]
+
[[Category: Parish T]]
-
[[Category: Rock, F L]]
+
[[Category: Plattner JJ]]
-
[[Category: Wang, Y]]
+
[[Category: Rock FL]]
-
[[Category: Waters, M G]]
+
[[Category: Wang Y]]
-
[[Category: Aminoacyl-trna synthetase]]
+
[[Category: Waters MG]]
-
[[Category: Leucine-trna ligase activity]]
+
-
[[Category: Ligase]]
+
-
[[Category: M tuberculosis]]
+
-
[[Category: Novel boron inhibitors of leur]]
+
-
[[Category: Protein biosynthesis]]
+

Current revision

Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP

PDB ID 5ags

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools