This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4wws

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Structure of Chlorite dismutase-like Protein from Listeria monocytogenes==
==Structure of Chlorite dismutase-like Protein from Listeria monocytogenes==
-
<StructureSection load='4wws' size='340' side='right' caption='[[4wws]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='4wws' size='340' side='right'caption='[[4wws]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4wws]] is a 5 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WWS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WWS FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4wws]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WWS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WWS FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wws FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wws OCA], [http://pdbe.org/4wws PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wws RCSB], [http://www.ebi.ac.uk/pdbsum/4wws PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wws ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wws FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wws OCA], [https://pdbe.org/4wws PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wws RCSB], [https://www.ebi.ac.uk/pdbsum/4wws PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wws ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Y2113_LISMO Y2113_LISMO]] May function as heme-dependent peroxidase.
+
[https://www.uniprot.org/uniprot/CHDC_LISMO CHDC_LISMO] Involved in coproporphyrin-dependent heme b biosynthesis (PubMed:27758026, PubMed:31423350). Catalyzes the decarboxylation of Fe-coproporphyrin III (coproheme) to heme b (protoheme IX), the last step of the pathway (PubMed:27758026, PubMed:31423350, PubMed:29536725). The reaction occurs in a stepwise manner with a three-propionate intermediate (PubMed:27758026, PubMed:31423350).<ref>PMID:27758026</ref> <ref>PMID:29536725</ref> <ref>PMID:31423350</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Djinovic-Carugo, K]]
+
[[Category: Large Structures]]
-
[[Category: Hagmueller, A]]
+
[[Category: Listeria monocytogenes EGD-e]]
-
[[Category: Mlynek, G]]
+
[[Category: Djinovic-Carugo K]]
-
[[Category: Chlorite dismutase-like protein]]
+
[[Category: Hagmueller A]]
-
[[Category: Ferredoxin-like fold]]
+
[[Category: Mlynek G]]
-
[[Category: Oxidoreductase]]
+

Current revision

Structure of Chlorite dismutase-like Protein from Listeria monocytogenes

PDB ID 4wws

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools