This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5bjo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "5bjo" [edit=sysop:move=sysop])
Current revision (12:17, 6 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5bjo is ON HOLD
+
==Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U==
-
 
+
<StructureSection load='5bjo' size='340' side='right'caption='[[5bjo]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[5bjo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BJO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BJO FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=747:(5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one'>747</scene>, <scene name='pdbligand=IU:5-IODOURIDINE-5-MONOPHOSPHATE'>IU</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bjo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bjo OCA], [https://pdbe.org/5bjo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bjo RCSB], [https://www.ebi.ac.uk/pdbsum/5bjo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bjo ProSAT]</span></td></tr>
 +
</table>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Synthetic construct]]
 +
[[Category: Ferre-D'Amare AR]]
 +
[[Category: Filonov GS]]
 +
[[Category: Jaffrey SR]]
 +
[[Category: Song W]]
 +
[[Category: Warner KD]]

Current revision

Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U

PDB ID 5bjo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools