5gsm
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5gsm is ON HOLD Authors: Watanabe, M., Kamachi, S., Mine, S. Description: Glycoside hydrolase B with product Category: Unreleased Structures [[...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Glycoside hydrolase B with product== | |
| - | + | <StructureSection load='5gsm' size='340' side='right'caption='[[5gsm]], [[Resolution|resolution]] 1.27Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5gsm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GSM FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.27Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B3P:2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>B3P</scene>, <scene name='pdbligand=GCS:D-GLUCOSAMINE'>GCS</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PPI:PROPANOIC+ACID'>PPI</scene></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gsm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gsm OCA], [https://pdbe.org/5gsm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gsm RCSB], [https://www.ebi.ac.uk/pdbsum/5gsm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gsm ProSAT]</span></td></tr> |
| - | [[Category: Kamachi | + | </table> |
| - | [[Category: Mine | + | == Function == |
| + | [https://www.uniprot.org/uniprot/GLMA_THEKO GLMA_THEKO] Exo-type enzyme that specifically cleaves the non-reducing terminal glycosidic bond of chitooligosaccharides (PubMed:12923090, PubMed:15136574, PubMed:28130448). Catalyzes the hydrolysis of GlcN-GlcNAc to glucosamine (GlcN) and N-acetylglucosamine (GlcNAc) (PubMed:15136574, PubMed:28130448). Involved in chitin degradation (PubMed:12923090, PubMed:15136574). Can also hydrolyze reduced chitobiose (GlcN2OH) and chitooligosaccharides of various chain lengths (PubMed:12923090).<ref>PMID:12923090</ref> <ref>PMID:15136574</ref> <ref>PMID:28130448</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thermococcus kodakarensis KOD1]] | ||
| + | [[Category: Kamachi S]] | ||
| + | [[Category: Mine S]] | ||
| + | [[Category: Watanabe M]] | ||
Current revision
Glycoside hydrolase B with product
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