1og6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:47, 17 April 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1og6.jpg|left|200px]]
 
-
{{Structure
+
==ydhF, an aldo-keto reductase from E.coli complexed with NADPH==
-
|PDB= 1og6 |SIZE=350|CAPTION= <scene name='initialview01'>1og6</scene>, resolution 2.8&Aring;
+
<StructureSection load='1og6' size='340' side='right'caption='[[1og6]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
|SITE= <scene name='pdbsite=AC1:Nap+Binding+Site+For+Chain+C'>AC1</scene>
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>
+
<table><tr><td colspan='2'>[[1og6]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OG6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OG6 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1og6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1og6 OCA], [https://pdbe.org/1og6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1og6 RCSB], [https://www.ebi.ac.uk/pdbsum/1og6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1og6 ProSAT], [https://www.topsan.org/Proteins/BIGS/1og6 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1og6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1og6 OCA], [http://www.ebi.ac.uk/pdbsum/1og6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1og6 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/YDHF_ECOLI YDHF_ECOLI] May function as oxidoreductase (Potential).
-
 
+
== Evolutionary Conservation ==
-
'''YDHF, AN ALDO-KETO REDUCTASE FROM E.COLI COMPLEXED WITH NADPH'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1og6_consurf.spt"</scriptWhenChecked>
-
1OG6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OG6 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Escherichia coli]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Abergel, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1og6 ConSurf].
-
[[Category: Claverie, J M.]]
+
<div style="clear:both"></div>
-
[[Category: IGS-CNRS, France BIGSBacterial targets at.]]
+
__TOC__
-
[[Category: Jeudy, S.]]
+
</StructureSection>
-
[[Category: aldo-keto reductase]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: alpha/beta barrel]]
+
[[Category: Large Structures]]
-
[[Category: bacterial targets at igs-cnr]]
+
[[Category: Abergel C]]
-
[[Category: big]]
+
[[Category: Claverie JM]]
-
[[Category: france]]
+
[[Category: Jeudy S]]
-
[[Category: nadph-dependant]]
+
-
[[Category: oxidoreductase]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:44:53 2008''
+

Current revision

ydhF, an aldo-keto reductase from E.coli complexed with NADPH

PDB ID 1og6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1og6"
Personal tools