5lvw
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 5lvw is ON HOLD Authors: Kugel, S., Baunach, M., Baer, P., Ishida-Ito, M., Sundaram, S., Xu, Z., Groll, M., Hertweck, C. Description: XiaF (FADH2) ...) |
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- | '''Unreleased structure''' | ||
- | + | ==XiaF (FADH2) from Streptomyces sp.== | |
+ | <StructureSection load='5lvw' size='340' side='right'caption='[[5lvw]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5lvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp. Streptomyces sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LVW FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=IND:INDOLE'>IND</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lvw OCA], [https://pdbe.org/5lvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lvw RCSB], [https://www.ebi.ac.uk/pdbsum/5lvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lvw ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/I7IIA9_9ACTN I7IIA9_9ACTN] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Terpenoid natural products comprise a wide range of molecular architectures that typically result from C-C bond formations catalysed by classical type I/II terpene cyclases. However, the molecular diversity of biologically active terpenoids is substantially increased by fully unrelated, non-canonical terpenoid cyclases. Their evolutionary origin has remained enigmatic. Here we report the in vitro reconstitution of an unusual flavin-dependent bacterial indoloterpenoid cyclase, XiaF, together with a designated flavoenzyme-reductase (XiaP) that mediates a key step in xiamycin biosynthesis. The crystal structure of XiaF with bound FADH2 (at 2.4 A resolution) and phylogenetic analyses reveal that XiaF is, surprisingly, most closely related to xenobiotic-degrading enzymes. Biotransformation assays show that XiaF is a designated indole hydroxylase that can be used for the production of indigo and indirubin. We unveil a cryptic hydroxylation step that sets the basis for terpenoid cyclization and suggest that the cyclase has evolved from xenobiotics detoxification enzymes. | ||
- | + | Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.,Kugel S, Baunach M, Baer P, Ishida-Ito M, Sundaram S, Xu Z, Groll M, Hertweck C Nat Commun. 2017 Jun 15;8:15804. doi: 10.1038/ncomms15804. PMID:28643772<ref>PMID:28643772</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 5lvw" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: Baunach | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Streptomyces sp]] |
- | [[Category: | + | [[Category: Baer P]] |
+ | [[Category: Baunach M]] | ||
+ | [[Category: Groll M]] | ||
+ | [[Category: Hertweck C]] | ||
+ | [[Category: Ishida-Ito M]] | ||
+ | [[Category: Kugel S]] | ||
+ | [[Category: Sundaram S]] | ||
+ | [[Category: Xu Z]] |
Current revision
XiaF (FADH2) from Streptomyces sp.
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Categories: Large Structures | Streptomyces sp | Baer P | Baunach M | Groll M | Hertweck C | Ishida-Ito M | Kugel S | Sundaram S | Xu Z