This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5iow

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:03, 30 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Xanthomonas campestris Peroxiredoxin Q - Structure FFcumene (Hyperoxidized by cumene hydroperoxide)==
==Xanthomonas campestris Peroxiredoxin Q - Structure FFcumene (Hyperoxidized by cumene hydroperoxide)==
-
<StructureSection load='5iow' size='340' side='right' caption='[[5iow]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
+
<StructureSection load='5iow' size='340' side='right'caption='[[5iow]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5iow]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IOW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5IOW FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5iow]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_campestris_pv._campestris_str._ATCC_33913 Xanthomonas campestris pv. campestris str. ATCC 33913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5IOW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5IOW FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5iiz|5iiz]], [[5im9|5im9]], [[5ima|5ima]], [[5imc|5imc]], [[5imd|5imd]], [[5imf|5imf]], [[5imv|5imv]], [[5imz|5imz]], [[5iny|5iny]], [[5io0|5io0]], [[5io2|5io2]], [[5iox|5iox]], [[5ipg|5ipg]], [[5iph|5iph]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5iow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iow OCA], [https://pdbe.org/5iow PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5iow RCSB], [https://www.ebi.ac.uk/pdbsum/5iow PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5iow ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5iow FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5iow OCA], [http://pdbe.org/5iow PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5iow RCSB], [http://www.ebi.ac.uk/pdbsum/5iow PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5iow ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BCP_XANCP BCP_XANCP] Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides and as sensor of hydrogen peroxide-mediated signaling events.<ref>PMID:19477183</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 5iow" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5iow" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Bacterioferritin comigratory protein|Bacterioferritin comigratory protein]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Karplus, A]]
+
[[Category: Large Structures]]
-
[[Category: Nelson, K J]]
+
[[Category: Xanthomonas campestris pv. campestris str. ATCC 33913]]
-
[[Category: Parsonage, D]]
+
[[Category: Karplus A]]
-
[[Category: Perkins, A]]
+
[[Category: Nelson KJ]]
-
[[Category: Poole, L B]]
+
[[Category: Parsonage D]]
-
[[Category: Bcp]]
+
[[Category: Perkins A]]
-
[[Category: Oxidoreductase]]
+
[[Category: Poole LB]]
-
[[Category: Peroxidase]]
+
-
[[Category: Prxq]]
+
-
[[Category: Redox]]
+

Current revision

Xanthomonas campestris Peroxiredoxin Q - Structure FFcumene (Hyperoxidized by cumene hydroperoxide)

PDB ID 5iow

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools