This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ly4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:27, 1 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal Structure of fluorophore-labeled Class A -lactamase PenP-E166Cb in complex with penicillin G==
==Crystal Structure of fluorophore-labeled Class A -lactamase PenP-E166Cb in complex with penicillin G==
-
<StructureSection load='3ly4' size='340' side='right' caption='[[3ly4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='3ly4' size='340' side='right'caption='[[3ly4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ly4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"clostridium_licheniforme"_weigmann_1898 "clostridium licheniforme" weigmann 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LY4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ly4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LY4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PNM:OPEN+FORM+-+PENICILLIN+G'>PNM</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ly3|3ly3]], [[3m2j|3m2j]], [[3m2k|3m2k]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PNM:OPEN+FORM+-+PENICILLIN+G'>PNM</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">penP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1402 "Clostridium licheniforme" Weigmann 1898])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ly4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ly4 OCA], [https://pdbe.org/3ly4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ly4 RCSB], [https://www.ebi.ac.uk/pdbsum/3ly4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ly4 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ly4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ly4 OCA], [http://pdbe.org/3ly4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ly4 RCSB], [http://www.ebi.ac.uk/pdbsum/3ly4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ly4 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BLAC_BACLI BLAC_BACLI]
==See Also==
==See Also==
-
*[[Beta-lactamase|Beta-lactamase]]
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Clostridium licheniforme weigmann 1898]]
+
[[Category: Bacillus licheniformis]]
-
[[Category: Beta-lactamase]]
+
[[Category: Large Structures]]
-
[[Category: Leung, Y C]]
+
[[Category: Leung YC]]
-
[[Category: Wong, W T]]
+
[[Category: Wong WT]]
-
[[Category: Zhao, Y X]]
+
[[Category: Zhao YX]]
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Biosensor]]
+
-
[[Category: Cell membrane]]
+
-
[[Category: Fluorophore]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Lipoprotein]]
+
-
[[Category: Membrane]]
+
-
[[Category: Palmitate]]
+

Current revision

Crystal Structure of fluorophore-labeled Class A -lactamase PenP-E166Cb in complex with penicillin G

PDB ID 3ly4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools