5k8e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:54, 6 November 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Xylooligosaccharide oxidase from Myceliophthora thermophila C1==
==Xylooligosaccharide oxidase from Myceliophthora thermophila C1==
-
<StructureSection load='5k8e' size='340' side='right' caption='[[5k8e]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
+
<StructureSection load='5k8e' size='340' side='right'caption='[[5k8e]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5k8e]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K8E FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5k8e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermothelomyces_thermophilus_ATCC_42464 Thermothelomyces thermophilus ATCC 42464]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5K8E FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8e OCA], [http://pdbe.org/5k8e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k8e RCSB], [http://www.ebi.ac.uk/pdbsum/5k8e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8e ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5k8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8e OCA], [https://pdbe.org/5k8e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5k8e RCSB], [https://www.ebi.ac.uk/pdbsum/5k8e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8e ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYLO_THET4 XYLO_THET4] Catalyzes the selective oxidation of C1 hydroxyl moieties on mono-, oligo- and polysaccharides with concomitant reduction of molecular oxygen to hydrogen peroxide. This results in the formation of the corresponding lactones, which typically undergo spontaneous hydrolysis. Xylooligosaccharide oxidase is able to oxidize a variety of substrates including D-xylose, D-cellobiose, lactose and arabinose. The enzyme acts primarily on xylooligosaccharides, indicating that it prefers pentose-based oligosaccharides over hexose-based oligosaccharides.<ref>PMID:27629413</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ferrari, A R]]
+
[[Category: Large Structures]]
-
[[Category: Fraaije, M W]]
+
[[Category: Thermothelomyces thermophilus ATCC 42464]]
-
[[Category: Rozeboom, H J]]
+
[[Category: Ferrari AR]]
-
[[Category: Cazy]]
+
[[Category: Fraaije MW]]
-
[[Category: Fad]]
+
[[Category: Rozeboom HJ]]
-
[[Category: Oligosaccharide]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Xylan]]
+
-
[[Category: Xylose]]
+

Current revision

Xylooligosaccharide oxidase from Myceliophthora thermophila C1

PDB ID 5k8e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5k8e"
Personal tools