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4qb9

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Crystal structure of Mycobacterium smegmatis Eis in complex with paromomycin

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 ==Crystal structure of Mycobacterium smegmatis Eis in complex with paromomycin==
-<StructureSection load='4qb9' size='340' side='right' caption='[[4qb9]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
+<StructureSection load='4qb9' size='340' side='right'caption='[[4qb9]], [[Resolution|resolution]] 3.29&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4qb9]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QB9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QB9 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4qb9]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QB9 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PAR:PAROMOMYCIN'>PAR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.293&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qb9 OCA], [http://pdbe.org/4qb9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qb9 RCSB], [http://www.ebi.ac.uk/pdbsum/4qb9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qb9 ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PAR:PAROMOMYCIN'>PAR</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qb9 OCA], [https://pdbe.org/4qb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qb9 RCSB], [https://www.ebi.ac.uk/pdbsum/4qb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qb9 ProSAT]</span></td></tr>
 </table>
-<div style="background-color:#fffaf0;">
+== Function ==
-== Publication Abstract from PubMed ==
+[https://www.uniprot.org/uniprot/A0QY29_MYCS2 A0QY29_MYCS2]
-The Rv2416c gene of Mycobacterium tuberculosis (Mtb) encodes the enhanced intracellular survival (Eis) protein that enhances intracellular survival of the pathogen in host macrophages during infection. The Mtb Eis protein is released into the cytoplasm of the phagocyte during intracellular infection and modulates the host immune response. It also contributes to drug resistance by acetylating multiple amine groups of aminoglycosides. Interestingly, the nonpathogenic M. smegmatis (Msm) contains a homologous eis gene (MSMEG_3513). The overall structures of Mtb Eis and Msm Eis are highly similar to each other, reflecting the high level (58%) of amino-acid sequence identity between them. Both Mtb Eis and Msm Eis are active as aminoglycoside acetyltransferases, while only Mtb Eis functions as an N()-acetyltransferase to acetylate Lys55 of dual-specificity protein phosphatase 16 (DUSP16)/mitogen-activated protein kinase phosphatase 7 (MKP-7), leading to the suppression of host immune responses. Here, the crystal structure of Msm Eis in the paromomycin-bound form is reported, revealing detailed interactions between an aminoglycoside antibiotic and Msm Eis. The crystal structure of Msm Eis in the paromomycin-bound form has been determined at 3.3 A resolution. This work provides potentially useful information for structure-guided discovery of Eis inhibitors as a novel antituberculosis drug against drug-resistant Mtb.
-Structure of Mycobacterium smegmatis Eis in complex with paromomycin.,Kim KH, An DR, Yoon HJ, Yang JK, Suh SW Acta Crystallogr F Struct Biol Commun. 2014 Sep;70(Pt 9):1173-9. doi:, 10.1107/S2053230X14017385. Epub 2014 Aug 29. PMID:25195887<ref>PMID:25195887</ref>
-From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-</div>
-<div class="pdbe-citations 4qb9" style="background-color:#fffaf0;"></div>
-== References ==
-<references/>
 __TOC__
 </StructureSection>
-[[Category: Ahn, D R]]
+[[Category: Large Structures]]
-[[Category: Kim, K H]]
+[[Category: Mycolicibacterium smegmatis MC2 155]]
-[[Category: Suh, S W]]
+[[Category: Ahn DR]]
-[[Category: Yang, J K]]
+[[Category: Kim KH]]
-[[Category: Yoon, H J]]
+[[Category: Suh SW]]
-[[Category: Acetyltransferase]]
+[[Category: Yang JK]]
-[[Category: Gnat fold]]
+[[Category: Yoon HJ]]
-[[Category: Scp fold]]
-[[Category: Transferase]]

4qb9

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Crystal structure of Mycobacterium smegmatis Eis in complex with paromomycin

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