This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5icg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:45, 30 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase==
==Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase==
-
<StructureSection load='5icg' size='340' side='right' caption='[[5icg]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+
<StructureSection load='5icg' size='340' side='right'caption='[[5icg]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5icg]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ICG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ICG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5icg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thalictrum_flavum_subsp._glaucum Thalictrum flavum subsp. glaucum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ICG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ICG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5icc|5icc]], [[5ice|5ice]], [[5icf|5icf]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/(RS)-norcoclaurine_6-O-methyltransferase (RS)-norcoclaurine 6-O-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.128 2.1.1.128] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5icg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5icg OCA], [https://pdbe.org/5icg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5icg RCSB], [https://www.ebi.ac.uk/pdbsum/5icg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5icg ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5icg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5icg OCA], [http://pdbe.org/5icg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5icg RCSB], [http://www.ebi.ac.uk/pdbsum/5icg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5icg ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/6OMT_THLFG 6OMT_THLFG] Involved in the biosynthesis of coclaurine, a precursor of benzylisoquinoline alkaloids (PubMed:27232113). Catalyzes the transfer of the S-methyl group of S-adenosyl-L-methionine (AdoMet) to the 6-hydroxyl group of norcoclaurine to form coclaurine (PubMed:27232113).<ref>PMID:27232113</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dumas, R]]
+
[[Category: Large Structures]]
-
[[Category: Giustini, C]]
+
[[Category: Thalictrum flavum subsp. glaucum]]
-
[[Category: Graindorge, M]]
+
[[Category: Dumas R]]
-
[[Category: Matringe, M]]
+
[[Category: Giustini C]]
-
[[Category: Robin, A Y]]
+
[[Category: Graindorge M]]
-
[[Category: Benzylisoquinoline alkaloid]]
+
[[Category: Matringe M]]
-
[[Category: Methyltransferase]]
+
[[Category: Robin AY]]
-
[[Category: Transferase]]
+

Current revision

Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase

PDB ID 5icg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools