5m11
From Proteopedia
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(New page: '''Unreleased structure''' The entry 5m11 is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures) |
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- | '''Unreleased structure''' | ||
- | + | ==Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.== | |
+ | <StructureSection load='5m11' size='340' side='right'caption='[[5m11]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5m11]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M11 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M11 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m11 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m11 OCA], [https://pdbe.org/5m11 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m11 RCSB], [https://www.ebi.ac.uk/pdbsum/5m11 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m11 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9S3Q8_PORGN Q9S3Q8_PORGN] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Porphyromonas gingivalis is a member of the human oral microbiome abundant in dysbiosis and implicated in the pathogenesis of periodontal (gum) disease. It employs a newly described type-IX secretion system (T9SS) for secretion of virulence factors. Cargo proteins destined for secretion through T9SS carry a recognition signal in the conserved C-terminal domain (CTD), which is removed by sortase PorU during translocation. Here, we identified a novel component of T9SS, PorZ, which is essential for surface exposure of PorU and posttranslational modification of T9SS cargo proteins. These include maturation of enzyme precursors, CTD removal and attachment of anionic lipopolysaccharide for anchorage in the outer membrane. The crystal structure of PorZ revealed two beta-propeller domains and a C-terminal beta-sandwich domain, which conforms to the canonical CTD architecture. We further documented that PorZ is itself transported to the cell surface via T9SS as a full-length protein with its CTD intact, independently of the presence or activity of PorU. Taken together, our results shed light on the architecture and possible function of a novel component of the T9SS. Knowledge of how T9SS operates will contribute to our understanding of protein secretion as part of host-microbiome interactions by dysbiotic members of the human oral cavity. | ||
- | + | Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.,Lasica AM, Goulas T, Mizgalska D, Zhou X, de Diego I, Ksiazek M, Madej M, Guo Y, Guevara T, Nowak M, Potempa B, Goel A, Sztukowska M, Prabhakar AT, Bzowska M, Widziolek M, Thogersen IB, Enghild JJ, Simonian M, Kulczyk AW, Nguyen KA, Potempa J, Gomis-Ruth FX Sci Rep. 2016 Nov 24;6:37708. doi: 10.1038/srep37708. PMID:27883039<ref>PMID:27883039</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 5m11" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Porphyromonas gingivalis]] | ||
+ | [[Category: Bzowska M]] | ||
+ | [[Category: Enghild JJ]] | ||
+ | [[Category: Goel A]] | ||
+ | [[Category: Gomis-Ruth FX]] | ||
+ | [[Category: Goulas T]] | ||
+ | [[Category: Guevara T]] | ||
+ | [[Category: Guo Y]] | ||
+ | [[Category: Ksiazek M]] | ||
+ | [[Category: Kulczyk AW]] | ||
+ | [[Category: Lasica AM]] | ||
+ | [[Category: Madej M]] | ||
+ | [[Category: Mizgalska D]] | ||
+ | [[Category: Nguyen K-A]] | ||
+ | [[Category: Nowak M]] | ||
+ | [[Category: Potempa B]] | ||
+ | [[Category: Potempa J]] | ||
+ | [[Category: Prabhakar AT]] | ||
+ | [[Category: Simonian M]] | ||
+ | [[Category: Sztukowska M]] | ||
+ | [[Category: Thogersen IB]] | ||
+ | [[Category: Widziolek M]] | ||
+ | [[Category: Zhou X]] |
Current revision
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
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Categories: Large Structures | Porphyromonas gingivalis | Bzowska M | Enghild JJ | Goel A | Gomis-Ruth FX | Goulas T | Guevara T | Guo Y | Ksiazek M | Kulczyk AW | Lasica AM | Madej M | Mizgalska D | Nguyen K-A | Nowak M | Potempa B | Potempa J | Prabhakar AT | Simonian M | Sztukowska M | Thogersen IB | Widziolek M | Zhou X