5b1r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:55, 8 November 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of mouse CD72a CTLD==
==Crystal structure of mouse CD72a CTLD==
-
<StructureSection load='5b1r' size='340' side='right' caption='[[5b1r]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
+
<StructureSection load='5b1r' size='340' side='right'caption='[[5b1r]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5b1r]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B1R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5B1R FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5b1r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B1R FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5b1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b1r OCA], [http://pdbe.org/5b1r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5b1r RCSB], [http://www.ebi.ac.uk/pdbsum/5b1r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5b1r ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b1r OCA], [https://pdbe.org/5b1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b1r RCSB], [https://www.ebi.ac.uk/pdbsum/5b1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b1r ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CD72_MOUSE CD72_MOUSE]] Plays a role in B-cell proliferation and differentiation.
+
[https://www.uniprot.org/uniprot/CD72_MOUSE CD72_MOUSE] Plays a role in B-cell proliferation and differentiation.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Toll-like receptor 7 (TLR7) plays an essential role in development of systemic lupus erythematosus by co-stimulating B cells reactive to the endogenous TLR7 ligand Sm/ribonucleoprotein (RNP), a crucial lupus self-antigen. However, how the TLR7-mediated autoimmune response is regulated is not yet known. In this study, we demonstrate that CD72, an inhibitory B cell co-receptor known to prevent development of lupus, recognizes Sm/RNP at the extracellular C-type lectin-like domain (CTLD) and specifically inhibits B cell response to Sm/RNP. Moreover, the CTLD of CD72c, a lupus-susceptible allele, binds to Sm/RNP less strongly than that of lupus-resistant CD72a Reduced binding of CD72c is supported by x-ray crystallographic analysis that reveals a considerable alteration in charge at the putative ligand-binding site. Thus, CD72 appears to specifically inhibit B cell response to the endogenous TLR7 ligand Sm/RNP through CTLD-mediated recognition of Sm/RNP, thereby preventing production of anti-Sm/RNP antibody crucial for development of lupus.
 +
 
 +
CD72 negatively regulates B lymphocyte responses to the lupus-related endogenous toll-like receptor 7 ligand Sm/RNP.,Akatsu C, Shinagawa K, Numoto N, Liu Z, Ucar AK, Aslam M, Phoon S, Adachi T, Furukawa K, Ito N, Tsubata T J Exp Med. 2016 Nov 14;213(12):2691-2706. Epub 2016 Oct 24. PMID:27810925<ref>PMID:27810925</ref>
 +
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 5b1r" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ito, N]]
+
[[Category: Large Structures]]
-
[[Category: Numoto, N]]
+
[[Category: Mus musculus]]
-
[[Category: Shinagawa, K]]
+
[[Category: Ito N]]
-
[[Category: Tsubata, T]]
+
[[Category: Numoto N]]
-
[[Category: B-cell]]
+
[[Category: Shinagawa K]]
-
[[Category: C-type lectin]]
+
[[Category: Tsubata T]]
-
[[Category: Immune system]]
+

Current revision

Crystal structure of mouse CD72a CTLD

PDB ID 5b1r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools