1ppo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:13, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ppo.gif|left|200px]]
 
-
{{Structure
+
==DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA==
-
|PDB= 1ppo |SIZE=350|CAPTION= <scene name='initialview01'>1ppo</scene>, resolution 1.8&Aring;
+
<StructureSection load='1ppo' size='340' side='right'caption='[[1ppo]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>
+
<table><tr><td colspan='2'>[[1ppo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PPO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PPO FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Caricain Caricain], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.30 3.4.22.30] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ppo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppo OCA], [https://pdbe.org/1ppo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ppo RCSB], [https://www.ebi.ac.uk/pdbsum/1ppo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ppo ProSAT]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppo OCA], [http://www.ebi.ac.uk/pdbsum/1ppo PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ppo RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/PAPA3_CARPA PAPA3_CARPA]
-
 
+
== Evolutionary Conservation ==
-
'''DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/1ppo_consurf.spt"</scriptWhenChecked>
-
1PPO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Carica_papaya Carica papaya]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PPO OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ppo ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Carica papaya]]
[[Category: Carica papaya]]
-
[[Category: Caricain]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Goodenough PW]]
-
[[Category: Goodenough, P W.]]
+
[[Category: Harris GW]]
-
[[Category: Harris, G W.]]
+
[[Category: Pickersgill RW]]
-
[[Category: Pickersgill, R W.]]
+
[[Category: Rizkallah PJ]]
-
[[Category: Rizkallah, P.]]
+
-
[[Category: hydrolase(thiol protease)]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:02:53 2008''
+

Current revision

DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA

PDB ID 1ppo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools