5fbe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:45, 19 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND2==
==COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND2==
-
<StructureSection load='5fbe' size='340' side='right' caption='[[5fbe]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
+
<StructureSection load='5fbe' size='340' side='right'caption='[[5fbe]], [[Resolution|resolution]] 1.43&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5fbe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FBE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FBE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5fbe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FBE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FBE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5W5:METHYL+2-[[[(2~{S})-2-[[3-(TRIFLUOROMETHYLOXY)PHENYL]CARBAMOYL]PYRROLIDIN-1-YL]CARBONYLAMINO]METHYL]BENZOATE'>5W5</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.43&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Complement_factor_D Complement factor D], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.46 3.4.21.46] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5W5:METHYL+2-[[[(2~{S})-2-[[3-(TRIFLUOROMETHYLOXY)PHENYL]CARBAMOYL]PYRROLIDIN-1-YL]CARBONYLAMINO]METHYL]BENZOATE'>5W5</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fbe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fbe OCA], [http://pdbe.org/5fbe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fbe RCSB], [http://www.ebi.ac.uk/pdbsum/5fbe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fbe ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fbe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fbe OCA], [https://pdbe.org/5fbe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fbe RCSB], [https://www.ebi.ac.uk/pdbsum/5fbe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fbe ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
-
[[http://www.uniprot.org/uniprot/CFAD_HUMAN CFAD_HUMAN]] Defects in CFD are the cause of complement factor D deficiency (CFDD) [MIM:[http://omim.org/entry/613912 613912]]. CFDD is an immunologic disorder characterized by increased susceptibility to bacterial infections, particularly Neisseria infections, due to a defect in the alternative complement pathway.
+
[https://www.uniprot.org/uniprot/CFAD_HUMAN CFAD_HUMAN] Defects in CFD are the cause of complement factor D deficiency (CFDD) [MIM:[https://omim.org/entry/613912 613912]. CFDD is an immunologic disorder characterized by increased susceptibility to bacterial infections, particularly Neisseria infections, due to a defect in the alternative complement pathway.
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CFAD_HUMAN CFAD_HUMAN]] Factor D cleaves factor B when the latter is complexed with factor C3b, activating the C3bbb complex, which then becomes the C3 convertase of the alternate pathway. Its function is homologous to that of C1s in the classical pathway.
+
[https://www.uniprot.org/uniprot/CFAD_HUMAN CFAD_HUMAN] Factor D cleaves factor B when the latter is complexed with factor C3b, activating the C3bbb complex, which then becomes the C3 convertase of the alternate pathway. Its function is homologous to that of C1s in the classical pathway.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:
</div>
</div>
<div class="pdbe-citations 5fbe" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5fbe" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Complement C3 3D structures|Complement C3 3D structures]]
 +
*[[Complement factor 3D structures|Complement factor 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Complement factor D]]
+
[[Category: Homo sapiens]]
-
[[Category: Ostermann, N]]
+
[[Category: Large Structures]]
-
[[Category: Zink, F]]
+
[[Category: Ostermann N]]
-
[[Category: Hydrolase]]
+
[[Category: Zink F]]

Current revision

COMPLEMENT FACTOR D IN COMPLEX WITH COMPOUND2

PDB ID 5fbe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools