1pv5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:13, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1pv5.gif|left|200px]]
 
-
{{Structure
+
==Structure of Protein of Unknown Function YwqG from Bacillus subtilis==
-
|PDB= 1pv5 |SIZE=350|CAPTION= <scene name='initialview01'>1pv5</scene>, resolution 1.75&Aring;
+
<StructureSection load='1pv5' size='340' side='right'caption='[[1pv5]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[1pv5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PV5 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3878 COG3878]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pv5 OCA], [https://pdbe.org/1pv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pv5 RCSB], [https://www.ebi.ac.uk/pdbsum/1pv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pv5 ProSAT], [https://www.topsan.org/Proteins/MCSG/1pv5 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pv5 OCA], [http://www.ebi.ac.uk/pdbsum/1pv5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pv5 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/YWQG_BACSU YWQG_BACSU]
-
 
+
== Evolutionary Conservation ==
-
'''Structure of Protein of Unknown Function YwqG from Bacillus subtilis'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pv/1pv5_consurf.spt"</scriptWhenChecked>
-
1PV5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PV5 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pv5 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: Kim, Y.]]
+
[[Category: Kim Y]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Quartey P]]
-
[[Category: Quartey, P.]]
+
-
[[Category: hypothetical protein]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomic]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: ywqg]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:04:56 2008''
+

Current revision

Structure of Protein of Unknown Function YwqG from Bacillus subtilis

PDB ID 1pv5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools