5h6j
From Proteopedia
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(New page: '''Unreleased structure''' The entry 5h6j is ON HOLD Authors: Description: Category: Unreleased Structures) |
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- | '''Unreleased structure''' | ||
- | + | ==DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+== | |
- | + | <StructureSection load='5h6j' size='340' side='right'caption='[[5h6j]], [[Resolution|resolution]] 1.90Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[5h6j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pieris_rapae Pieris rapae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H6J FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> | |
- | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h6j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6j OCA], [https://pdbe.org/5h6j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h6j RCSB], [https://www.ebi.ac.uk/pdbsum/5h6j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6j ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PRSN_PIERA PRSN_PIERA] ADP-ribosylates double-stranded DNA by targeting the N2 amino group of dG residues; 10-fold less active on tRNA. Induces apoptosis in a range of human cell lines (PubMed:10485873, PubMed:11592983). May play a role in removing unnecessary or harmful cells during pupation (PubMed:15528160) (Probable). May play a role in defense against parasitic wasps; its habitual predator Cotesia glomerata is only susceptible after removal of its eggshell or the surface of the larval caudal vesicle, while other wasps are damaged by this protein (PubMed:23637752) (Probable). The wild-type catalytic domain (residues 1-233) cannot be expressed in E.coli as it is unstable probably due to its toxicity. A catalytic domain fragment (Glu-165 mutated to Gln) binds dsDNA but not ssDNA; the presence of the linker inhibits DNA-binding (PubMed:28765284).<ref>PMID:10485873</ref> <ref>PMID:11592983</ref> <ref>PMID:28765284</ref> <ref>PMID:15528160</ref> <ref>PMID:23637752</ref> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Pieris rapae]] | ||
+ | [[Category: Hashimoto H]] | ||
+ | [[Category: Hirabayashi H]] | ||
+ | [[Category: Hiraga K]] | ||
+ | [[Category: Minami H]] | ||
+ | [[Category: Oda T]] | ||
+ | [[Category: Sato M]] | ||
+ | [[Category: Shikauchi G]] | ||
+ | [[Category: Shimizu T]] | ||
+ | [[Category: Sugimura T]] | ||
+ | [[Category: Takamura R]] | ||
+ | [[Category: Wakabayashi K]] | ||
+ | [[Category: Yamamoto M]] |
Current revision
DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+
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Categories: Large Structures | Pieris rapae | Hashimoto H | Hirabayashi H | Hiraga K | Minami H | Oda T | Sato M | Shikauchi G | Shimizu T | Sugimura T | Takamura R | Wakabayashi K | Yamamoto M