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5h6l

From Proteopedia

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(New page: '''Unreleased structure''' The entry 5h6l is ON HOLD Authors: Description: Category: Unreleased Structures)
Current revision (09:15, 20 March 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5h6l is ON HOLD
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==DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+==
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<StructureSection load='5h6l' size='340' side='right'caption='[[5h6l]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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Authors:
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5h6l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pieris_rapae Pieris rapae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H6L FirstGlance]. <br>
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Description:
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h6l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6l OCA], [https://pdbe.org/5h6l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h6l RCSB], [https://www.ebi.ac.uk/pdbsum/5h6l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6l ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PRSN_PIERA PRSN_PIERA] ADP-ribosylates double-stranded DNA by targeting the N2 amino group of dG residues; 10-fold less active on tRNA. Induces apoptosis in a range of human cell lines (PubMed:10485873, PubMed:11592983). May play a role in removing unnecessary or harmful cells during pupation (PubMed:15528160) (Probable). May play a role in defense against parasitic wasps; its habitual predator Cotesia glomerata is only susceptible after removal of its eggshell or the surface of the larval caudal vesicle, while other wasps are damaged by this protein (PubMed:23637752) (Probable). The wild-type catalytic domain (residues 1-233) cannot be expressed in E.coli as it is unstable probably due to its toxicity. A catalytic domain fragment (Glu-165 mutated to Gln) binds dsDNA but not ssDNA; the presence of the linker inhibits DNA-binding (PubMed:28765284).<ref>PMID:10485873</ref> <ref>PMID:11592983</ref> <ref>PMID:28765284</ref> <ref>PMID:15528160</ref> <ref>PMID:23637752</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Pieris rapae]]
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[[Category: Hashimoto H]]
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[[Category: Hirabayashi H]]
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[[Category: Hiraga K]]
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[[Category: Minami H]]
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[[Category: Oda T]]
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[[Category: Sato M]]
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[[Category: Shikauchi G]]
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[[Category: Shimizu T]]
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[[Category: Sugimura T]]
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[[Category: Takamura R]]
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[[Category: Wakabayashi K]]
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[[Category: Yamamoto M]]

Current revision

DNA targeting ADP-ribosyltransferase Pierisin-1 in complex with beta-NAD+

PDB ID 5h6l

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