5cx8
From Proteopedia
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==Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.== | ==Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.== | ||
| - | <StructureSection load='5cx8' size='340' side='right' caption='[[5cx8]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='5cx8' size='340' side='right'caption='[[5cx8]], [[Resolution|resolution]] 2.40Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5cx8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CX8 OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[5cx8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis_W83 Porphyromonas gingivalis W83]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CX8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CX8 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3DO:3-DEOXY-BETA-D-RIBO-HEXOPYRANOSE'>3DO</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=RP3:3-DEOXY-D-RIBOFURANOSE-5-PHOSPHATE'>RP3</scene>, <scene name='pdbligand=TG6:6-O-PHOSPHONO-D-TAGATOSE'>TG6 | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3DO:3-DEOXY-BETA-D-RIBO-HEXOPYRANOSE'>3DO</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=RP3:3-DEOXY-D-RIBOFURANOSE-5-PHOSPHATE'>RP3</scene>, <scene name='pdbligand=TG6:6-O-PHOSPHONO-D-TAGATOSE'>TG6</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cx8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cx8 OCA], [https://pdbe.org/5cx8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cx8 RCSB], [https://www.ebi.ac.uk/pdbsum/5cx8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cx8 ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/F5H948_PORGI F5H948_PORGI] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Garcia-Ferrer | + | [[Category: Large Structures]] |
| - | [[Category: Gomis-Ruth | + | [[Category: Porphyromonas gingivalis W83]] |
| - | [[Category: Goulas | + | [[Category: Garcia-Ferrer I]] |
| - | [[Category: Hutcherson | + | [[Category: Gomis-Ruth FX]] |
| - | [[Category: Potempa | + | [[Category: Goulas T]] |
| - | [[Category: Potempa | + | [[Category: Hutcherson JA]] |
| - | [[Category: Scott | + | [[Category: Potempa BA]] |
| - | + | [[Category: Potempa J]] | |
| - | + | [[Category: Scott DA]] | |
Current revision
Structure of RagB, a major immunodominant virulence factor of Porphyromonas gingivalis.
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