This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5i34

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:21, 23 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Adenylosuccinate synthetase from Cryptococcus neoformans complexed with GDP and IMP==
==Adenylosuccinate synthetase from Cryptococcus neoformans complexed with GDP and IMP==
-
<StructureSection load='5i34' size='340' side='right' caption='[[5i34]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
+
<StructureSection load='5i34' size='340' side='right'caption='[[5i34]], [[Resolution|resolution]] 1.53&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5i34]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I34 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5I34 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5i34]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptococcus_neoformans_var._grubii_H99 Cryptococcus neoformans var. grubii H99]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5I34 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5I34 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=IMP:INOSINIC+ACID'>IMP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.53&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5i33|5i33]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=IMP:INOSINIC+ACID'>IMP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylosuccinate_synthase Adenylosuccinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.4 6.3.4.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5i34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i34 OCA], [https://pdbe.org/5i34 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5i34 RCSB], [https://www.ebi.ac.uk/pdbsum/5i34 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5i34 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5i34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5i34 OCA], [http://pdbe.org/5i34 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5i34 RCSB], [http://www.ebi.ac.uk/pdbsum/5i34 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5i34 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/J9VI09_CRYNH J9VI09_CRYNH]] Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.[HAMAP-Rule:MF_03125] Plays an important role in the de novo pathway of purine nucleotide biosynthesis.[RuleBase:RU000520]
+
[https://www.uniprot.org/uniprot/J9VI09_CRYNH J9VI09_CRYNH] Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.[HAMAP-Rule:MF_03125] Plays an important role in the de novo pathway of purine nucleotide biosynthesis.[RuleBase:RU000520]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Adenylosuccinate Synthetase|Adenylosuccinate Synthetase]]
+
*[[Adenylosuccinate synthetase 3D structures|Adenylosuccinate synthetase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenylosuccinate synthase]]
+
[[Category: Cryptococcus neoformans var. grubii H99]]
-
[[Category: Blundell, R D]]
+
[[Category: Large Structures]]
-
[[Category: Ericsson, D]]
+
[[Category: Blundell RD]]
-
[[Category: Fraser, J A]]
+
[[Category: Ericsson D]]
-
[[Category: Kobe, B]]
+
[[Category: Fraser JA]]
-
[[Category: Williams, S J]]
+
[[Category: Kobe B]]
-
[[Category: Adenylosuccinate synthetase]]
+
[[Category: Williams SJ]]
-
[[Category: Dimer]]
+
-
[[Category: Ligase]]
+
-
[[Category: Purine metabolism]]
+

Current revision

Adenylosuccinate synthetase from Cryptococcus neoformans complexed with GDP and IMP

PDB ID 5i34

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5i34"
Personal tools