This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ktl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:54, 27 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.==
==Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.==
-
<StructureSection load='5ktl' size='340' side='right' caption='[[5ktl]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
+
<StructureSection load='5ktl' size='340' side='right'caption='[[5ktl]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ktl]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KTL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KTL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ktl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichormus_variabilis_ATCC_29413 Trichormus variabilis ATCC 29413]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KTL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5KTL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KPI:(2S)-2-AMINO-6-[(1-HYDROXY-1-OXO-PROPAN-2-YLIDENE)AMINO]HEXANOIC+ACID'>KPI</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KPI:(2S)-2-AMINO-6-[(1-HYDROXY-1-OXO-PROPAN-2-YLIDENE)AMINO]HEXANOIC+ACID'>KPI</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5kt0|5kt0]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ktl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ktl OCA], [https://pdbe.org/5ktl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ktl RCSB], [https://www.ebi.ac.uk/pdbsum/5ktl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ktl ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ktl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ktl OCA], [http://pdbe.org/5ktl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ktl RCSB], [http://www.ebi.ac.uk/pdbsum/5ktl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ktl ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q3M723_ANAVT Q3M723_ANAVT]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[HAMAP-Rule:MF_00418][SAAS:SAAS00570606]
+
[https://www.uniprot.org/uniprot/Q3M723_TRIV2 Q3M723_TRIV2] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).[ARBA:ARBA00003294][HAMAP-Rule:MF_00418]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 19:
</div>
</div>
<div class="pdbe-citations 5ktl" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5ktl" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
+
[[Category: Large Structures]]
-
[[Category: Christensen, J B]]
+
[[Category: Trichormus variabilis ATCC 29413]]
-
[[Category: Panjikar, S]]
+
[[Category: Christensen JB]]
-
[[Category: Perugini, M]]
+
[[Category: Panjikar S]]
-
[[Category: Cyanobacteria]]
+
[[Category: Perugini M]]
-
[[Category: Dhdp]]
+
-
[[Category: Diaminopimelate biosynthesis pathway]]
+
-
[[Category: Enzyme]]
+
-
[[Category: Lyase]]
+

Current revision

Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis.

PDB ID 5ktl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5ktl"
Personal tools