5u3j

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'''Unreleased structure'''
 
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The entry 5u3j is ON HOLD
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==Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide==
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<StructureSection load='5u3j' size='340' side='right'caption='[[5u3j]], [[Resolution|resolution]] 2.74&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5u3j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U3J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U3J FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.74&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u3j OCA], [https://pdbe.org/5u3j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u3j RCSB], [https://www.ebi.ac.uk/pdbsum/5u3j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u3j ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/V9QIE5_9HIV1 V9QIE5_9HIV1]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Induction of broadly neutralizing antibodies (bnAbs) is a goal of HIV-1 vaccine development. Antibody 10E8, reactive with the distal portion of the membrane-proximal external region (MPER) of HIV-1 gp41, is broadly neutralizing. However, the ontogeny of distal MPER antibodies and the relationship of memory B cell to plasma bnAbs are poorly understood. HIV-1-specific memory B cell flow sorting and proteomic identification of anti-MPER plasma antibodies from an HIV-1-infected individual were used to isolate broadly neutralizing distal MPER bnAbs of the same B cell clonal lineage. Structural analysis demonstrated that antibodies from memory B cells and plasma recognized the envelope gp41 bnAb epitope in a distinct orientation compared with other distal MPER bnAbs. The unmutated common ancestor of this distal MPER bnAb was autoreactive, suggesting lineage immune tolerance control. Construction of chimeric antibodies of memory B cell and plasma antibodies yielded a bnAb that potently neutralized most HIV-1 strains.
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Authors: Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F.
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Potent and broad HIV-neutralizing antibodies in memory B cells and plasma.,Williams LD, Ofek G, Schatzle S, McDaniel JR, Lu X, Nicely NI, Wu L, Lougheed CS, Bradley T, Louder MK, McKee K, Bailer RT, O'Dell S, Georgiev IS, Seaman MS, Parks RJ, Marshall DJ, Anasti K, Yang G, Nie X, Tumba NL, Wiehe K, Wagh K, Korber B, Kepler TB, Munir Alam S, Morris L, Kamanga G, Cohen MS, Bonsignori M, Xia SM, Montefiori DC, Kelsoe G, Gao F, Mascola JR, Moody MA, Saunders KO, Liao HX, Tomaras GD, Georgiou G, Haynes BF Sci Immunol. 2017 Jan 27;2(7). pii: eaal2200. doi: 10.1126/sciimmunol.aal2200. PMID:28783671<ref>PMID:28783671</ref>
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Description: Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Haynes, B.F]]
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<div class="pdbe-citations 5u3j" style="background-color:#fffaf0;"></div>
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[[Category: Wu, L]]
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== References ==
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[[Category: Ofek, G]]
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<references/>
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[[Category: Lougheed, C.S]]
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__TOC__
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[[Category: Williams, L.D]]
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</StructureSection>
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[[Category: Nicely, N.I]]
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[[Category: Homo sapiens]]
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[[Category: Human immunodeficiency virus 1]]
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[[Category: Large Structures]]
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[[Category: Haynes BF]]
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[[Category: Lougheed CS]]
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[[Category: Nicely NI]]
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[[Category: Ofek G]]
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[[Category: Williams LD]]
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[[Category: Wu L]]

Current revision

Crystal Structure of DH511.1 Fab in Complex with HIV-1 gp41 MPER Peptide

PDB ID 5u3j

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