This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4g1r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:55, 8 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of anti-HIV actinohivin in complex with alphs-1,2-mannobiose (Form II)==
==Crystal structure of anti-HIV actinohivin in complex with alphs-1,2-mannobiose (Form II)==
-
<StructureSection load='4g1r' size='340' side='right' caption='[[4g1r]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
+
<StructureSection load='4g1r' size='340' side='right'caption='[[4g1r]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4g1r]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Actinomycete_sp9440 Actinomycete sp9440]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G1R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4G1R FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4g1r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinomycete_K97-0003 Actinomycete K97-0003]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4G1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4G1R FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=2M4:2-O-ALPHA-D-MANNOPYRANOSYL-ALPHA-D-MANNOPYRANOSE'>2M4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.57&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a07|3a07]], [[4den|4den]], [[4end|4end]], [[4g1s|4g1s]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=PRD_900111:2alpha-alpha-mannobiose'>PRD_900111</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g1r OCA], [http://pdbe.org/4g1r PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4g1r RCSB], [http://www.ebi.ac.uk/pdbsum/4g1r PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4g1r ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4g1r OCA], [https://pdbe.org/4g1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4g1r RCSB], [https://www.ebi.ac.uk/pdbsum/4g1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4g1r ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AHV_ACTSK AHV_ACTSK]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Actinomycete sp9440]]
+
[[Category: Actinomycete K97-0003]]
-
[[Category: Hoque, M M]]
+
[[Category: Large Structures]]
-
[[Category: Jiang, J]]
+
[[Category: Hoque MM]]
-
[[Category: Naomi, O]]
+
[[Category: Jiang J]]
-
[[Category: Omura, S]]
+
[[Category: Naomi O]]
-
[[Category: Sekiguchi, T]]
+
[[Category: Omura S]]
-
[[Category: Suzuki, K]]
+
[[Category: Sekiguchi T]]
-
[[Category: Takahashi, A]]
+
[[Category: Suzuki K]]
-
[[Category: Takenaka, A]]
+
[[Category: Takahashi A]]
-
[[Category: Tanaka, H]]
+
[[Category: Takenaka A]]
-
[[Category: Tsunoda, M]]
+
[[Category: Tanaka H]]
-
[[Category: Zhang, F]]
+
[[Category: Tsunoda M]]
-
[[Category: Zhang, X]]
+
[[Category: Zhang F]]
-
[[Category: Actinohivin]]
+
[[Category: Zhang X]]
-
[[Category: Anti-hiv lectin]]
+
-
[[Category: Antiviral protein]]
+
-
[[Category: High-mannose type glycan]]
+

Current revision

Crystal structure of anti-HIV actinohivin in complex with alphs-1,2-mannobiose (Form II)

PDB ID 4g1r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools