4hnz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:42, 1 March 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of eukaryotic HslV from Trypanosoma brucei==
==Crystal structure of eukaryotic HslV from Trypanosoma brucei==
-
<StructureSection load='4hnz' size='340' side='right' caption='[[4hnz]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
+
<StructureSection load='4hnz' size='340' side='right'caption='[[4hnz]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4hnz]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Tryb2 Tryb2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HNZ FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4hnz]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei_brucei_TREU927 Trypanosoma brucei brucei TREU927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HNZ FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.393&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tb11.01.2000 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=999953 TRYB2])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hnz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hnz OCA], [http://pdbe.org/4hnz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hnz RCSB], [http://www.ebi.ac.uk/pdbsum/4hnz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hnz ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hnz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hnz OCA], [https://pdbe.org/4hnz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hnz RCSB], [https://www.ebi.ac.uk/pdbsum/4hnz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hnz ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
+
== Function ==
-
== Publication Abstract from PubMed ==
+
[https://www.uniprot.org/uniprot/HSLV_TRYB2 HSLV_TRYB2] Protease subunit of a proteasome-like degradation complex. HslU recognizes protein substrates and unfolds these before guiding them to HslV for hydrolysis. HslV is not believed to degrade folded proteins (By similarity). The HslVU protease complex functions in mitochondrial DNA replication by regulating DNA helicase PIF2 protein levels.<ref>PMID:18421378</ref>
-
In many bacteria, heat shock locus V (HslV) functions as a protease, which is activated by heat shock locus U (HslU). The primary sequence and structure of HslV are well conserved with those of the beta-subunit of the 20S proteasome core particle in eukaryotes. To date, the HslVU complex has only been characterized in the prokaryotic system. Recently, however, the coexistence of a 20S proteasome with HslV protease in the same living organism has been reported. In Trypanosoma brucei, a protozoan parasite that causes human sleeping sickness in Africa, HslV is localized in the mitochondria, where it has a novel function in regulating mitochondrial DNA replication. Although the prokaryotic HslVU system has been studied extensively, little is known regarding its eukaryotic counterpart. Here, we report the biochemical characteristics of an HslVU complex from T. brucei. In contrast to the prokaryotic system, T. brucei possesses 2 potential HslU molecules and we found that only one of them activates HslV. A key activating residue, Tyr494, was identified in HslU2 by biochemical and mutational studies. Furthermore, to our knowledge, this study is the first to report the crystal structure of a eukaryotic HslV, determined at 2.4 A resolution. Drawing on our comparison of the biochemical and structural data, we discuss herein the differences and similarities between eukaryotic and prokaryotic HslVs.
+
-
 
+
-
Structural and biochemical analyses of the eukaryotic HslV from Trypanosoma brucei.,Sung KH, Lee SY, Song HK J Biol Chem. 2013 Jul 1. PMID:23818520<ref>PMID:23818520</ref>
+
-
 
+
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+
-
</div>
+
-
<div class="pdbe-citations 4hnz" style="background-color:#fffaf0;"></div>
+
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Tryb2]]
+
[[Category: Large Structures]]
-
[[Category: Lee, S Y]]
+
[[Category: Trypanosoma brucei brucei TREU927]]
-
[[Category: Song, H K]]
+
[[Category: Lee SY]]
-
[[Category: Sung, K H]]
+
[[Category: Song HK]]
-
[[Category: Hydrolase]]
+
[[Category: Sung KH]]
-
[[Category: Mitochondria]]
+

Current revision

Crystal structure of eukaryotic HslV from Trypanosoma brucei

PDB ID 4hnz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4hnz"
Personal tools