This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2iwb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:27, 13 December 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==MecR1 unbound extracellular antibiotic-sensor domain.==
==MecR1 unbound extracellular antibiotic-sensor domain.==
-
<StructureSection load='2iwb' size='340' side='right' caption='[[2iwb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+
<StructureSection load='2iwb' size='340' side='right'caption='[[2iwb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2iwb]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IWB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2IWB FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2iwb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_N315 Staphylococcus aureus subsp. aureus N315] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IWB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IWB FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2iwc|2iwc]], [[2iwd|2iwd]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2iwb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iwb OCA], [http://pdbe.org/2iwb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2iwb RCSB], [http://www.ebi.ac.uk/pdbsum/2iwb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2iwb ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iwb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iwb OCA], [https://pdbe.org/2iwb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iwb RCSB], [https://www.ebi.ac.uk/pdbsum/2iwb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iwb ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MECR_STAAN MECR_STAAN]] Penicillin-interactive protein and potential antirepressor (By similarity).
+
[https://www.uniprot.org/uniprot/MECR_STAAN MECR_STAAN] Penicillin-interactive protein and potential antirepressor (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iwb_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iw/2iwb_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 33: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Garcia-Castellanos, R]]
+
[[Category: Large Structures]]
-
[[Category: Gomis-Ruth, F X]]
+
[[Category: Staphylococcus aureus subsp. aureus N315]]
-
[[Category: Guevara, T]]
+
[[Category: Synthetic construct]]
-
[[Category: Mallorqui-Fernandez, G]]
+
[[Category: Garcia-Castellanos R]]
-
[[Category: Marrero, A]]
+
[[Category: Gomis-Ruth FX]]
-
[[Category: Antibiotic resistance]]
+
[[Category: Guevara T]]
-
[[Category: Bacterial antibiotic resistance]]
+
[[Category: Mallorqui-Fernandez G]]
-
[[Category: Beta-lactamase]]
+
[[Category: Marrero A]]
-
[[Category: Beta-lactamic antibiotic]]
+
-
[[Category: Methicillin resistance]]
+
-
[[Category: Mrsa]]
+
-
[[Category: Penicillin-binding protein]]
+

Current revision

MecR1 unbound extracellular antibiotic-sensor domain.

PDB ID 2iwb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools