This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4qu3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:38, 20 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==GES-2 ertapenem acyl-enzyme complex==
==GES-2 ertapenem acyl-enzyme complex==
-
<StructureSection load='4qu3' size='340' side='right' caption='[[4qu3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4qu3' size='340' side='right'caption='[[4qu3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4qu3]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QU3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QU3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4qu3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QU3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QU3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1RG:(4R,5S)-3-({(3S,5S)-5-[(3-CARBOXYPHENYL)CARBAMOYL]PYRROLIDIN-3-YL}SULFANYL)-5-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-4-METHYL-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC+ACID'>1RG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.402&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ni9|3ni9]], [[3nia|3nia]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1RG:(4R,5S)-3-({(3S,5S)-5-[(3-CARBOXYPHENYL)CARBAMOYL]PYRROLIDIN-3-YL}SULFANYL)-5-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-4-METHYL-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC+ACID'>1RG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qu3 OCA], [http://pdbe.org/4qu3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4qu3 RCSB], [http://www.ebi.ac.uk/pdbsum/4qu3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4qu3 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qu3 OCA], [https://pdbe.org/4qu3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qu3 RCSB], [https://www.ebi.ac.uk/pdbsum/4qu3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qu3 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q93F76_PSEAI Q93F76_PSEAI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 21:
==See Also==
==See Also==
-
*[[Beta-lactamase|Beta-lactamase]]
+
*[[Beta-lactamase 3D structures|Beta-lactamase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Black, D J]]
+
[[Category: Large Structures]]
-
[[Category: Frase, H]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Smith, C A]]
+
[[Category: Black DJ]]
-
[[Category: Stewart, N K]]
+
[[Category: Frase H]]
-
[[Category: Vakulenko, S B]]
+
[[Category: Smith CA]]
-
[[Category: Antibiotic resistance]]
+
[[Category: Stewart NK]]
-
[[Category: Beta-lactamase]]
+
[[Category: Vakulenko SB]]
-
[[Category: Ertapenem]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase-antibiotic complex]]
+

Current revision

GES-2 ertapenem acyl-enzyme complex

PDB ID 4qu3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools