Vascular Endothelial Growth Factor Receptor

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<StructureSection load='3c7q' size='350' side='right' scene=Vascular_Endothelial_Growth_Factor_Recptor/Vegfr-2_number_2_opening/2' caption='Human VEGFR kinase domain complex with anti tumor inhibitor and sulfate (PDB code [[3c7q]])'>
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<StructureSection load='' size='350' side='right' scene='41/411436/Cv/1' caption='Human VEGFR kinase domain complex with anti-tumor inhibitor and sulfate (PDB code [[3c7q]])'>
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==Introduction==
==Introduction==
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[[Vascular Endothelial Growth Factor Receptor]]s (VEGFRs) are tyrosine kinase receptors responsible for binding with [[VEGF]] to initiate signal cascades that stimulate angiogenesis among other effects. VEGFRs convey signals to other signal transduction effectors via autophosphorylation of specific residues in its structure. Because VEGFRs are up-regulated in cancerous tumors which have a high metabolic need for oxygen, VEGFRs are an important target for [[pharmaceutical drugs]] treating [[cancer]]. VEGFR subtypes are numbered 1,2,3.
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[[Vascular Endothelial Growth Factor Receptor]]s (VEGFRs) are [[tyrosine kinase receptors]] responsible for binding with [[VEGF]] to initiate signal cascades that stimulate angiogenesis among other effects<ref>PMID:22130231</ref>. VEGFRs convey signals to other signal transduction effectors via autophosphorylation of specific residues in its structure. Because VEGFRs are up-regulated in cancerous tumors which have a high metabolic need for oxygen, VEGFRs are an important target for [[pharmaceutical drugs]] treating [[cancer]]. VEGFR subtypes are numbered 1,2,3.
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*'''VEGFR-1''' regulates angiogenesis and has no kinase activity while '''VEGFR-2''' also regulates angiogenesis and has kinase activity<ref>PMID:16146773</ref>.
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*'''VEGFR-3''' regulates lymphangiogenesis and has a role in blood vessel angiogenesis<ref>PMID:11745682</ref>.
[[Image: VEGF_receptors.png|250px|left|thumb| Interaction of VEGFs with VEGFRs. Colored arrows indicate major pathway. Black arrows indicate minor pathway.]]
[[Image: VEGF_receptors.png|250px|left|thumb| Interaction of VEGFs with VEGFRs. Colored arrows indicate major pathway. Black arrows indicate minor pathway.]]
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See also [[Kinase-linked, enzyme-linked and related receptors]].
==Biological Function ==
==Biological Function ==
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The structure of VEGFR-2 can been seen at the right. VEGF-A binds to the second and third extracellular Ig-like domains of VEGFR-2 with a 10-fold lower affinity than it does to the second Ig-like domain of VEGFR-1, despite the fact that VEGFR-2 is the principal mediator of several physiological effects on endothelial cells including proliferation, migration, and survival.<ref> PMID:9813036</ref> Binding of VEGF to the domains 2 and 3 of a VEGFR-2 monomer increases the probability that an additional VEGFR-2 binds the tethered ligand to form a dimmer. Once the two receptors are cross-linked, interactions between their membrane-proximal domain 7s stabilize the dimmer significantly. This dimerization and stabilization allows for precise positioning of the intracellular kinase domains, resulting in autophosphorylation and subsequent activation of the classical extracellular signal-regulated kinases (ERK) pathway.<ref>PMID:17293873</ref>.
The structure of VEGFR-2 can been seen at the right. VEGF-A binds to the second and third extracellular Ig-like domains of VEGFR-2 with a 10-fold lower affinity than it does to the second Ig-like domain of VEGFR-1, despite the fact that VEGFR-2 is the principal mediator of several physiological effects on endothelial cells including proliferation, migration, and survival.<ref> PMID:9813036</ref> Binding of VEGF to the domains 2 and 3 of a VEGFR-2 monomer increases the probability that an additional VEGFR-2 binds the tethered ligand to form a dimmer. Once the two receptors are cross-linked, interactions between their membrane-proximal domain 7s stabilize the dimmer significantly. This dimerization and stabilization allows for precise positioning of the intracellular kinase domains, resulting in autophosphorylation and subsequent activation of the classical extracellular signal-regulated kinases (ERK) pathway.<ref>PMID:17293873</ref>.
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The tyrosine kinase domain of VEGFR-2 is separated into two segments with a 70 amino acid long kinase insert region. Upon binding VEGFA and subsequent dimerization, VEGFR-2 is autophosphoryalted at the carboxy terminal tail and kinase insert region. Six tyrosine residues of VEGFR2 are autophosphorylated (see Fig.1<ref>PMID:15962004</ref>). Auto- phosphorylation of residues <scene name='41/411436/Res_1054-1059/2'>1054 and 1059</scene> within the activation loop of VEGFR2 leads to increased kinase activity<ref>PMID:10037737</ref>.<br />
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The tyrosine kinase domain of VEGFR-2 is separated into two segments with a 70 amino acid long kinase insert region. Upon binding VEGFA and subsequent dimerization, VEGFR-2 is autophosphoryalted at the carboxy terminal tail and kinase insert region. Six tyrosine residues of VEGFR2 are autophosphorylated (see Fig.1<ref>PMID:15962004</ref>). <scene name='41/411436/Cv/2'>Auto-phosphorylation of residues1054 and 1059</scene> within the activation loop of VEGFR2 leads to increased kinase activity<ref>PMID:10037737</ref>.<br />
==Medical significance==
==Medical significance==
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Bevacizumab ([[Avastin]]) is a recombinant [[monoclonal antibody]] marketed by the pharmaceutical company Roche. It earned over $5 billion dollars in 2009 treating a number of cancers. It’s principal mechanism of action is as an anti-VEGF antibody that favors antiangiogenesis in the tumor microenvironment while effecting the rest of the body to a lesser extent. It has been found to decrease tumor vascular permeability subsequently reducing the delivery of oxygen and nutrients to cancer cells when used in combination with chemotherapy.<ref>PMID:11533692 </ref> Other drugs target VEGFR such as [[Sorafenib]] ([[Nexavar]]), [[Sunitinib]] ([[Sutent]]) and Vandetanib, binding to various parts of the receptor, either preventing interaction with [[VEGF]] or with other downstream signaling molecules.
Bevacizumab ([[Avastin]]) is a recombinant [[monoclonal antibody]] marketed by the pharmaceutical company Roche. It earned over $5 billion dollars in 2009 treating a number of cancers. It’s principal mechanism of action is as an anti-VEGF antibody that favors antiangiogenesis in the tumor microenvironment while effecting the rest of the body to a lesser extent. It has been found to decrease tumor vascular permeability subsequently reducing the delivery of oxygen and nutrients to cancer cells when used in combination with chemotherapy.<ref>PMID:11533692 </ref> Other drugs target VEGFR such as [[Sorafenib]] ([[Nexavar]]), [[Sunitinib]] ([[Sutent]]) and Vandetanib, binding to various parts of the receptor, either preventing interaction with [[VEGF]] or with other downstream signaling molecules.
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*<scene name='41/411436/Cv/4'>Anti-tumor inhibitor binding site</scene> (PDB code [[3c7q]]).
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</StructureSection>
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==[[3D structures of vascular endothelial growth factor receptor]]==
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__NOTOC__
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== 3D Structures of VEGFR==
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
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{{#tree:id=OrganizedByTopic|openlevels=0|
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*VEGFR-1
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**[[1rv6]] - hVEGFR-1 domain 2 + PlGF - human <br />
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**[[4ckv]] - hVEGFR-1 domain 2 + Zn<br />
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**[[4cl7]] - hVEGFR-1 domain 2 + Co<br />
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**[[5abd]] - hVEGFR-1 domain 2 + Cu<br />
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**[[1qsv]] - hVEGFR-1 VEGF-binding domain – NMR<br />
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**[[2xac]] – hVEGFR-1D2 + hVEGF-B<br />
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**[[3hng]] - hVEGFR-1 kinase domain + N-(4-Chlorophenyl)-2-((pyridin-4-ylmethyl)amino)benzamid <br />
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*VEGFR-2
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**[[3kvq]] - hVEGFR-2 extracellular domain 7<br />
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**[[1vr2]] - hVEGFR-2 kinase domain (mutant)<br />
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**[[2m59]], [[2met]], [[2meu]] - hVEGFR-2 transmembrane domain – NMR<br />
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**[[2x1w]], [[2x1x]] – hVEGFR-2 IG-like domains 2 & 3 +hVEGF-C<br />
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**[[3v2a]] - hVEGFR-2 + hVEGF-A<br />
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**[[3v6b]] - hVEGFR-2 residues 132-548 + hVEGF-E<br />
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**[[3efl]] – hVEGFR-2 kinase domain (mutant)+ motesanib <br />
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**[[4ag8]], [[4agc]], [[4agd]], [[4asd]], [[4ase]], [[3vo3]], [[3wzd]], [[3wze]], [[5ew3]] - hVEGFR-2 kinase domain (mutant) + cancer drug<br />
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**[[3ewh]], [[3cjf]], [[3cjg]], [[3vhe]] - hVEGFR-2 kinase domain + pyrimidine derivative<br />
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**[[3c7q]] - hVEGFR-2 kinase domain + BIBF1120<br />
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**[[3dtw]] - hVEGFR-2 kinase domain + benzisoxazole <br />
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**[[3cp9]], [[3cpb]], [[3cpc]], [[3be2]], [[3b8q]], [[3b8r]], [[2qu5]], [[2qu6]], [[2p2h]], [[2p2i]], [[1ywn]], [[1y6a]], [[1y6b]],[[3vid]], [[3vhk]] - hVEGFR-2 kinase domain + inhibitor<br />
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**[[2oh4]], [[2rl5]], [[2xir]], [[3u6j]], [[3vnt]] - hVEGFR-2 kinase domain (mutant)+ inhibitor<br />
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**[[3s35]], [[3s36]], [[3s37]] - hVEGFR-2 extracellular domain 3 + Fab heavy+light chains
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*VEGFR-3
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**[[4bsj]] - hVEGFR-3 extracellular domain 4 & 5<br />
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**[[4bsk]] - hVEGFR-3 extracellular domain 1 & 2 + VEGF-C<br />
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*VEGF 165 receptor (neuropilin) see [[Neuropilin]]
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}}
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==Additional Resources==
==Additional Resources==
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==References==
==References==
<references />
<references />
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</StructureSection>
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[[Category:Topic Page]]
[[Category:Topic Page]]

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Human VEGFR kinase domain complex with anti-tumor inhibitor and sulfate (PDB code 3c7q)

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