5jym

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:15, 20 September 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Human P-cadherin EC12 with scFv TSP11 bound==
==Human P-cadherin EC12 with scFv TSP11 bound==
-
<StructureSection load='5jym' size='340' side='right' caption='[[5jym]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
+
<StructureSection load='5jym' size='340' side='right'caption='[[5jym]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jym]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JYM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JYM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jym]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JYM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5jyl|5jyl]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jym OCA], [http://pdbe.org/5jym PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jym RCSB], [http://www.ebi.ac.uk/pdbsum/5jym PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jym ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jym OCA], [https://pdbe.org/5jym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jym RCSB], [https://www.ebi.ac.uk/pdbsum/5jym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jym ProSAT]</span></td></tr>
</table>
</table>
== Disease ==
== Disease ==
-
[[http://www.uniprot.org/uniprot/CADH3_HUMAN CADH3_HUMAN]] Hypotrichosis with juvenile macular degeneration;EEM syndrome. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry.
+
[https://www.uniprot.org/uniprot/CADH3_HUMAN CADH3_HUMAN] Hypotrichosis with juvenile macular degeneration;EEM syndrome. The disease is caused by mutations affecting the gene represented in this entry. The disease is caused by mutations affecting the gene represented in this entry.
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CADH3_HUMAN CADH3_HUMAN]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.
+
[https://www.uniprot.org/uniprot/CADH3_HUMAN CADH3_HUMAN] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:
</div>
</div>
<div class="pdbe-citations 5jym" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5jym" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Antibody 3D structures|Antibody 3D structures]]
 +
*[[Cadherin 3D structures|Cadherin 3D structures]]
 +
*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
 +
*[[3D structures of non-human antibody|3D structures of non-human antibody]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Caaveiro, J M.M]]
+
[[Category: Homo sapiens]]
-
[[Category: Kudo, S]]
+
[[Category: Large Structures]]
-
[[Category: Tsumoto, K]]
+
[[Category: Mus musculus]]
-
[[Category: Antibody]]
+
[[Category: Caaveiro JMM]]
-
[[Category: Cadherin]]
+
[[Category: Kudo S]]
-
[[Category: Cell adhesion]]
+
[[Category: Tsumoto K]]
-
[[Category: Cell adhesion-immune system complex]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein-protein interaction]]
+

Current revision

Human P-cadherin EC12 with scFv TSP11 bound

PDB ID 5jym

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools