5u8t

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:47, 21 November 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5u8t is ON HOLD
+
==Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications==
 +
<SX load='5u8t' size='340' side='right' viewer='molstar' caption='[[5u8t]], [[Resolution|resolution]] 4.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5u8t]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5U8T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5U8T FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5u8t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5u8t OCA], [https://pdbe.org/5u8t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5u8t RCSB], [https://www.ebi.ac.uk/pdbsum/5u8t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5u8t ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MCM4_YEAST MCM4_YEAST] Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Once loaded onto DNA, double hexamers can slide on dsDNA in the absence of ATPase activity. Required for S phase execution.<ref>PMID:19896182</ref> <ref>PMID:19910535</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The eukaryotic CMG (Cdc45, Mcm2-7, GINS) helicase consists of the Mcm2-7 hexameric ring along with five accessory factors. The Mcm2-7 heterohexamer, like other hexameric helicases, is shaped like a ring with two tiers, an N-tier ring composed of the N-terminal domains, and a C-tier of C-terminal domains; the C-tier contains the motor. In principle, either tier could translocate ahead of the other during movement on DNA. We have used cryo-EM single-particle 3D reconstruction to solve the structure of CMG in complex with a DNA fork. The duplex stem penetrates into the central channel of the N-tier and the unwound leading single-strand DNA traverses the channel through the N-tier into the C-tier motor, 5'-3' through CMG. Therefore, the N-tier ring is pushed ahead by the C-tier ring during CMG translocation, opposite the currently accepted polarity. The polarity of the N-tier ahead of the C-tier places the leading Pol epsilon below CMG and Pol alpha-primase at the top of CMG at the replication fork. Surprisingly, the new N-tier to C-tier polarity of translocation reveals an unforeseen quality-control mechanism at the origin. Thus, upon assembly of head-to-head CMGs that encircle double-stranded DNA at the origin, the two CMGs must pass one another to leave the origin and both must remodel onto opposite strands of single-stranded DNA to do so. We propose that head-to-head motors may generate energy that underlies initial melting at the origin.
-
Authors: Li, B., Georgescu, R., Yuan, Z., Santos, R., Sun, J., Zhang, D., Yurieva, O., Li, H., O'Donnell, M.E.
+
Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.,Georgescu R, Yuan Z, Bai L, de Luna Almeida Santos R, Sun J, Zhang D, Yurieva O, Li H, O'Donnell ME Proc Natl Acad Sci U S A. 2017 Jan 17. pii: 201620500. doi:, 10.1073/pnas.1620500114. PMID:28096349<ref>PMID:28096349</ref>
-
Description: Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Santos, R]]
+
<div class="pdbe-citations 5u8t" style="background-color:#fffaf0;"></div>
-
[[Category: O'Donnell, M.E]]
+
== References ==
-
[[Category: Li, H]]
+
<references/>
-
[[Category: Sun, J]]
+
__TOC__
-
[[Category: Georgescu, R]]
+
</SX>
-
[[Category: Yuan, Z]]
+
[[Category: Large Structures]]
-
[[Category: Zhang, D]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Yurieva, O]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Li, B]]
+
[[Category: Georgescu R]]
 +
[[Category: Li B]]
 +
[[Category: Li H]]
 +
[[Category: O'Donnell ME]]
 +
[[Category: Santos R]]
 +
[[Category: Sun J]]
 +
[[Category: Yuan Z]]
 +
[[Category: Yurieva O]]
 +
[[Category: Zhang D]]

Current revision

Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications

5u8t, resolution 4.90Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools