User:Charli Barbet/Sandbox

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<scene name='75/750264/Sh2/1'>SH2 DOMAIN</scene>:
<scene name='75/750264/Sh2/1'>SH2 DOMAIN</scene>:
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SH2 domain is a domain that is approximately 100 amino acids long with a very conserved structure has been identified in several human and rodent proteins such as [https://en.wikipedia.org/wiki/Phosphatase phosphatases], [https://en.wikipedia.org/wiki/Transcription_factor transcription factor], or [https://en.wikipedia.org/wiki/Signal_transducing_adaptor_protein adaptor] protein like Grb2.
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SH2 domain is a domain that is approximately 100 amino acids long with a very conserved structure. It has been identified in several human and rodent proteins such as [https://en.wikipedia.org/wiki/Phosphatase phosphatases], [https://en.wikipedia.org/wiki/Transcription_factor transcription factor], or [https://en.wikipedia.org/wiki/Signal_transducing_adaptor_protein adaptor] protein like Grb2.
This domain is ubiquitous in several protein implicated in cellular signaling pathways.Typically, the SH2 domain specifically recognizes sites with '''phosphorylated tyrosines'''. SH2 can, for instance bind to the intracellular region of EGF leading in turn, to the formation of protein signalization complexes. This binding and the role of SH2 is very important in '''the conversion of an extra-cellular signal in an intra-cellular signal''' giving rise to diversified cellular responses or the expression of specific genes. It is also important to note that the SH2 domain can bind to other SH2 domains. Nevertheless, a mutation in the specific binding site of SH2 can impede the interaction of two proteins and thus the formation of a protein complex. Therefore, mutations in SH2 can give rise to cellular dysfunction and lead to several diseases. <ref>PMID: 18767163</ref>
This domain is ubiquitous in several protein implicated in cellular signaling pathways.Typically, the SH2 domain specifically recognizes sites with '''phosphorylated tyrosines'''. SH2 can, for instance bind to the intracellular region of EGF leading in turn, to the formation of protein signalization complexes. This binding and the role of SH2 is very important in '''the conversion of an extra-cellular signal in an intra-cellular signal''' giving rise to diversified cellular responses or the expression of specific genes. It is also important to note that the SH2 domain can bind to other SH2 domains. Nevertheless, a mutation in the specific binding site of SH2 can impede the interaction of two proteins and thus the formation of a protein complex. Therefore, mutations in SH2 can give rise to cellular dysfunction and lead to several diseases. <ref>PMID: 18767163</ref>
<scene name='75/750264/Sh3/1'>SH3 DOMAIN</scene>:
<scene name='75/750264/Sh3/1'>SH3 DOMAIN</scene>:
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The SH3 domain is approximately 50 amino acid long. Largely '''expressed in proteins associated with the membrane'''. The domain is made of 5 to 6 β-sheets arranged in two antiparallel β-sheets. The linking region between the two β-sheets is made of α helices. This special conformation allows the '''arrangement of a hydrophobic pocket in which the ligand can bind.''' Typically, the binding region has a '''motif rich in Prolines: PXXP'''. This binding allows the formation of multi-proteins complexes involved in the translation and conversion of extra-cellular signals. The binding is thus largely involved in gene expression and protein concentration. <ref>PMID: 1279434</ref>
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The SH3 domain is approximately 50 amino acid long. Largely '''expressed in proteins associated with the membrane'''. The domain is made of 5 to 6 β-sheets arranged in two antiparallel β-sheets. The linking region between the two β-sheets is made of α helices. This special conformation allows the '''arrangement of a hydrophobic pocket in which the ligand can bind.''' Typically, the binding region has a '''motif rich in Prolines: PXXP'''. This binding allows the formation of multi-protein complexes involved in the translation and conversion of extra-cellular signals. The binding is thus largely involved in gene expression and protein concentration. <ref>PMID: 1279434</ref>
'''ISOFORM''':
'''ISOFORM''':
Grb2 posses an isoform, known as '''Grb3.3'''.
Grb2 posses an isoform, known as '''Grb3.3'''.
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Grb3.3 is present in cells but it '''induces apoptosis'''. The isoform has a very similar structure to Grb2 but is truncated from of 60th to the 100th amino acid resulting in a degradation of the SH2 domain and a loss of functionality. <ref>PMID: 8178156</ref>
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Grb3.3 is present in cells but it '''induces apoptosis'''. The isoform has a very similar structure to Grb2 but is truncated from the 60th to the 100th amino acid resulting in a degradation of the SH2 domain and a loss of functionality. <ref>PMID: 8178156</ref>
== '''Function''' ==
== '''Function''' ==
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The Grb2 isoform has a non-functional SH2 domain, unable to bind the phosphorylated tyrosines of its targeted protein (EGFR for instance). The inability of the molecule to transmit signal is translated by apoptosis of the cell, thus regulating growth signal.
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The Grb3.3 isoform has a non-functional SH2 domain, unable to bind the phosphorylated tyrosines of its targeted protein (EGFR for instance). The inability of the molecule to transmit signal is translated by apoptosis of the cell, thus regulating growth signal.
The functional isoform: Grb2, is involved in several cellular functions detailed below:
The functional isoform: Grb2, is involved in several cellular functions detailed below:
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[[Image:Y160.jpg|thumb|upright=3|[http://www.nature.com/articles/ncomms8354#abstract source]]]
[[Image:Y160.jpg|thumb|upright=3|[http://www.nature.com/articles/ncomms8354#abstract source]]]
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Grb2 protein is especially involved in the '''setting up of cellular oncognesis''' in prostate, colon and lung cancers. This role is mainly due to its essential role in signal transduction in the [https://en.wikipedia.org/wiki/Mitogen-activated_protein_kinase MAP kinase pathway] known to induce [https://en.wikipedia.org/wiki/Mitosis mitosis]. In this pathway, Grb2 binds to the oncogenic protein [http://www.uniprot.org/uniprot/Q07889 SOS] under its monomeric form. Yet [http://www.uniprot.org/uniprot/Q07889 SOS] can also be found in its dimeric form in the cell. Dimerization of Grb2 is dependent upon several factors like the phosphorylation of <scene name='75/750264/Y160/1'>tyrosine 160</scene> or the binding of ligand on the SH2 domain of the same protein. Mainly, phosphorylation induces the dissociation of the Grb2 dimer bringing about an increase in the MAP kinase pathway by the binding of [http://www.uniprot.org/uniprot/Q07889 SOS]. The phosphorylated state of <scene name='75/750264/Y160/1'>Y160</scene> has been discovered in several pre-metastatis cancers, highly suggesting that pY160 could be a oncogenic marker in humans. A new therapeutic strategy could therefore be considered by stabilizing Grb2 in its dimeric form. This could be achieved with a protein acting as an irreversible cross-link at the interface between the two units. <ref>PMID: 26103942</ref>
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Grb2 protein is especially involved in the '''setting up of cellular oncognesis''' in prostate, colon and lung cancers. This role is mainly due to its essential role in signal transduction in the [https://en.wikipedia.org/wiki/Mitogen-activated_protein_kinase MAP kinase pathway] known to induce [https://en.wikipedia.org/wiki/Mitosis mitosis]. In this pathway, Grb2 binds to the oncogenic protein [http://www.uniprot.org/uniprot/Q07889 SOS] under its monomeric form. Yet Grb2 can also be found in its dimeric form in the cell. Dimerization of Grb2 is dependent upon several factors like the phosphorylation of <scene name='75/750264/Y160/1'>tyrosine 160</scene> or the binding of ligand on the SH2 domain of the same protein. Mainly, phosphorylation induces the dissociation of the Grb2 dimer bringing about an increase in the MAP kinase pathway by the binding of [http://www.uniprot.org/uniprot/Q07889 SOS]. The phosphorylated state of <scene name='75/750264/Y160/1'>Y160</scene> has been discovered in several pre-metastatis cancers, highly suggesting that pY160 could be a oncogenic marker in humans. A new therapeutic strategy could therefore be considered by stabilizing Grb2 in its dimeric form. This could be achieved with a protein acting as an irreversible cross-link at the interface between the two units. <ref>PMID: 26103942</ref>
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Grb2 (1gri)

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Charli Barbet

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