5my5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 5my5 is ON HOLD Authors: Otrelo-Cardoso, A.R., Correia, M.A.S.C, Santos-Silva, T. Description: Tungstate binding protein -TupA -from Desulfovibrio ...)
Current revision (17:53, 8 November 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5my5 is ON HOLD
+
==Tungstate binding protein - TupA - from Desulfovibrio alaskensis G20==
 +
<StructureSection load='5my5' size='340' side='right'caption='[[5my5]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5my5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleidesulfovibrio_alaskensis_G20 Oleidesulfovibrio alaskensis G20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MY5 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5my5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5my5 OCA], [https://pdbe.org/5my5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5my5 RCSB], [https://www.ebi.ac.uk/pdbsum/5my5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5my5 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q316W1_OLEA2 Q316W1_OLEA2]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Molybdenum and tungsten are taken up by bacteria and archaea as their soluble oxyanions through high affinity transport systems belonging to the ATP-binding cassette (ABC) transporters. The component A (ModA/TupA) of these transporters is the first selection gate from which the cell differentiates between MoO42-, WO42- and other similar oxyanions. We report the biochemical characterization and the crystal structure of the apo-TupA from Desulfovibrio desulfuricans G20, at 1.4 A resolution. Small Angle X-ray Scattering data suggests that the protein adopts a closed and more stable conformation upon ion binding. The role of the arginine 118 in the selectivity of the oxyanion was also investigated and three mutants were constructed: R118K, R118E and R118Q. Isothermal titration calorimetry clearly shows the relevance of this residue for metal discrimination and oxyanion binding. In this sense, the three variants lost the ability to coordinate molybdate and the R118K mutant keeps an extremely high affinity for tungstate. These results contribute to an understanding of the metal-protein interaction, making it a suitable candidate for a recognition element of a biosensor for tungsten detection.
-
Authors: Otrelo-Cardoso, A.R., Correia, M.A.S.C, Santos-Silva, T.
+
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20.,Otrelo-Cardoso AR, Nair RR, Correia MAS, Cordeiro RSC, Panjkovich A, Svergun DI, Santos-Silva T, Rivas MG Sci Rep. 2017 Jul 19;7(1):5798. doi: 10.1038/s41598-017-06133-y. PMID:28724964<ref>PMID:28724964</ref>
-
Description: Tungstate binding protein -TupA -from Desulfovibrio alaskensis G20
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Correia, M.A.S.C, Santos-Silva, T]]
+
<div class="pdbe-citations 5my5" style="background-color:#fffaf0;"></div>
-
[[Category: Otrelo-Cardoso, A.R]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Oleidesulfovibrio alaskensis G20]]
 +
[[Category: Correia MASC]]
 +
[[Category: Otrelo-Cardoso AR]]
 +
[[Category: Santos-Silva T]]

Current revision

Tungstate binding protein - TupA - from Desulfovibrio alaskensis G20

PDB ID 5my5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools