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1sdq

From Proteopedia

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[[Image:1sdq.gif|left|200px]]
 
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{{Structure
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==Structure of reduced-NO adduct of mesopone cytochrome c peroxidase==
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|PDB= 1sdq |SIZE=350|CAPTION= <scene name='initialview01'>1sdq</scene>, resolution 1.69&Aring;
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<StructureSection load='1sdq' size='340' side='right'caption='[[1sdq]], [[Resolution|resolution]] 1.69&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=FMI:FE-(4-MESOPORPHYRINONE)-R-ISOMER'>FMI</scene>, <scene name='pdbligand=NO:NITROGEN+OXIDE'>NO</scene>
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<table><tr><td colspan='2'>[[1sdq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SDQ FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69&#8491;</td></tr>
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|GENE= CCP1, CCP, CPO, YKR066C, OBPYC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMI:FE-(4-MESOPORPHYRINONE)-R-ISOMER'>FMI</scene>, <scene name='pdbligand=NO:NITRIC+OXIDE'>NO</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sdq OCA], [https://pdbe.org/1sdq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sdq RCSB], [https://www.ebi.ac.uk/pdbsum/1sdq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sdq ProSAT]</span></td></tr>
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|RELATEDENTRY=[[2cyp|2CYP]], [[1kok|1KOK]], [[1s73|1S73]], [[1sbm|1SBM]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sdq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sdq OCA], [http://www.ebi.ac.uk/pdbsum/1sdq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1sdq RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/CCPR_YEAST CCPR_YEAST] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sd/1sdq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sdq ConSurf].
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<div style="clear:both"></div>
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'''Structure of reduced-NO adduct of mesopone cytochrome c peroxidase'''
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==See Also==
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*[[Cytochrome c peroxidase 3D structures|Cytochrome c peroxidase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1SDQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDQ OCA].
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[[Category: Large Structures]]
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[[Category: Cytochrome-c peroxidase]]
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[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Single protein]]
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[[Category: Bhaskar B]]
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[[Category: Bhaskar, B.]]
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[[Category: Cohem MS]]
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[[Category: Cohem, M S.]]
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[[Category: Farmer PJ]]
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[[Category: Farmer, P J.]]
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[[Category: Immoos CE]]
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[[Category: Immoos, C E.]]
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[[Category: Poulos TL]]
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[[Category: Poulos, T L.]]
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[[Category: Sulc F]]
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[[Category: Sulc, F.]]
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[[Category: 4-mesoporphyrinone]]
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[[Category: bifunctional catalyst]]
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[[Category: cytochrome c peroxidase]]
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[[Category: proximal loop]]
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[[Category: trp191 cation radical]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:40:40 2008''
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Current revision

Structure of reduced-NO adduct of mesopone cytochrome c peroxidase

PDB ID 1sdq

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